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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:46.2RPKM
FANTOM5:91.9Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA014372

 

Glial cells

Medium  

Neuronal cells

Not detected  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

46.2

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 46.2
Samples: 117

Max RPKM: 232.4
Min RPKM: 3.6
Std RPKM: 33.3
Median RPKM: 38.6
GTEX-QMR6-0011-R5A-SM-32PKT 232.4
GTEX-12WSA-0011-R5b-SM-5GU5I 214.2
GTEX-PVOW-0011-R5A-SM-32PL7 121.9
GTEX-N7MS-0011-R5a-SM-2HMK8 116.4
GTEX-13FHP-0011-R5b-SM-5LZY2 111.3
GTEX-Z93S-0011-R5b-SM-4RGNI 111.2
GTEX-R55E-0011-R5A-SM-2TC5N 105.4
GTEX-11NV4-0011-R5a-SM-5NQ88 95.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 90.7
GTEX-13NYB-0011-R5a-SM-5MR45 88.1
GTEX-13O3O-0011-R5b-SM-5KM44 87.4
GTEX-WZTO-0011-R5B-SM-3NMC5 84.5
GTEX-XOTO-0011-R5A-SM-4B657 81.3
GTEX-12WSB-0011-R5b-SM-5GU67 80.0
GTEX-OHPN-0011-R5A-SM-2I5FF 76.3
GTEX-YFC4-0011-R5a-SM-4RGLR 75.5
GTEX-WWYW-0011-R5A-SM-3NB3E 72.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 69.2
GTEX-13FLV-0011-R5a-SM-5LZWT 67.3
GTEX-12WSF-0011-R5a-SM-5HL8K 61.4
GTEX-YJ89-0011-R5a-SM-4V6GM 61.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60.8
GTEX-14BIN-0011-R5b-SM-5SI78 58.9
GTEX-13OVH-0011-R5b-SM-5KM4L 56.7
GTEX-13FLW-0011-R5a-SM-5LZX6 56.5
GTEX-ZUA1-0011-R5b-SM-51MTG 56.4
GTEX-13CF2-0011-R5a-SM-5LZWS 56.2
GTEX-144GL-0011-R5b-SM-5PNUJ 55.9
GTEX-P44H-0011-R5A-SM-2XCEX 55.3
GTEX-13FXS-0011-R5b-SM-5LZYE 53.7
GTEX-WL46-0011-R5A-SM-3LK6V 53.5
GTEX-145LS-0011-R5a-SM-5SI65 53.2
GTEX-ZXG5-0011-R5b-SM-57WBN 52.1
GTEX-WVLH-0011-R5A-SM-3MJFW 51.6
GTEX-X4XX-0011-R5A-SM-46MWN 50.9
GTEX-11H98-0011-R5b-SM-57WCF 49.6
GTEX-ZVT3-0011-R5a-SM-51MSI 49.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 48.7
GTEX-13X6K-0011-R5b-SM-5PNUE 48.3
GTEX-13112-0011-R5b-SM-5DUV8 48.1
GTEX-13OW7-0011-R5b-SM-5O9DM 47.7
GTEX-13X6I-0011-R5a-SM-5PNWW 47.6
GTEX-QVJO-0011-R5A-SM-2S1QM 46.8
GTEX-11UD1-0011-R5b-SM-5P9FP 46.1
GTEX-132Q8-0011-R5a-SM-5IJDM 44.5
GTEX-11WQC-0011-R5a-SM-5BC74 43.8
GTEX-145MH-0011-R5a-SM-5P9JT 43.6
GTEX-12WSD-0011-R5b-SM-5CVNG 43.1
GTEX-14ABY-0011-R5b-SM-5SI7B 42.8
GTEX-NL4W-0011-R5a-SM-2I3GD 42.6
GTEX-13OVL-0011-R5b-SM-5L3FU 41.8
GTEX-13JVG-0011-R5a-SM-5MR4O 40.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 40.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 40.2
GTEX-RVPV-0011-R5A-SM-2TF69 39.8
GTEX-RVPU-0011-R5A-SM-2XCAD 39.2
GTEX-ZE7O-0011-R5a-SM-57WBO 39.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 38.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 38.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 38.4
GTEX-1313W-0011-R5b-SM-5L3EP 37.3
GTEX-13OW6-0011-R5a-SM-5O9BK 37.3
GTEX-13S7M-0011-R5b-SM-5P9HS 37.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 36.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 36.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 34.9
GTEX-12ZZX-0011-R5a-SM-5HL89 34.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 33.8
GTEX-131YS-0011-R5b-SM-5K7YB 33.0
GTEX-S7SE-0011-R5A-SM-2XCDA 31.2
GTEX-T5JC-0011-R5A-SM-32PLK 30.8
GTEX-1445S-0011-R5a-SM-5PNUS 30.7
GTEX-139TT-0011-R5b-SM-5K7W8 29.9
GTEX-T6MN-0011-R5A-SM-32QPD 29.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 29.8
GTEX-X585-0011-R5A-SM-46MVI 29.5
GTEX-145MG-0011-R5b-SM-5S2VU 29.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 28.9
GTEX-12WSH-0011-R5b-SM-5P9F3 28.8
GTEX-139T8-0011-R5b-SM-5J1MO 28.6
GTEX-RU72-0011-R5A-SM-2TF6U 28.6
GTEX-UTHO-0011-R5A-SM-3GIJD 28.0
GTEX-139TS-0011-R5b-SM-5J2MZ 27.9
GTEX-12WSC-0011-R5b-SM-5CVNS 27.7
GTEX-13SLX-0011-R5a-SM-5O9BV 27.3
GTEX-13VXU-0011-R5a-SM-5O9D7 27.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 26.6
GTEX-1477Z-0011-R5b-SM-5PNUO 25.6
GTEX-11GSP-0011-R5a-SM-57WBE 25.5
GTEX-S7PM-0011-R5A-SM-3NM8G 25.3
GTEX-13CZV-0011-R5a-SM-5K7XA 24.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 24.0
GTEX-13X6J-0011-R5b-SM-5PNWT 24.0
GTEX-1399T-0011-R5b-SM-5IJDK 23.7
GTEX-OXRN-0011-R5A-SM-2I5EF 23.7
GTEX-14BIM-0011-R5b-SM-5S2RM 23.4
GTEX-XMD1-0011-R5A-SM-4AT47 23.3
GTEX-13OW5-0011-R5b-SM-5L3FR 22.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 22.0
GTEX-13NZA-0011-R5b-SM-5KM4K 21.5
GTEX-11OF3-0011-R5a-SM-57WB4 20.9
GTEX-ZV68-0011-R5a-SM-4YCDW 20.8
GTEX-N7MT-0011-R5a-SM-2I3G6 19.9
GTEX-13JUV-0011-R5a-SM-5LZY5 19.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 19.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 19.5
GTEX-T2IS-0011-R5A-SM-32QP4 19.4
GTEX-WHSE-0011-R5A-SM-3P5ZO 19.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 19.0
GTEX-TSE9-0011-R5A-SM-3DB7J 18.2
GTEX-13G51-0011-R5a-SM-5L3EB 17.9
GTEX-13NYS-0011-R5a-SM-5MR4D 16.4
GTEX-X261-0011-R5A-SM-3NMB4 16.1
GTEX-NL3H-0011-R5a-SM-2I3GB 14.8
GTEX-144GO-0011-R5a-SM-5PNUR 13.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 13.2
GTEX-13CIG-0011-R5b-SM-5L3F2 3.6
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

91.9

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 91.9
FF:10164-103B2 76 years, female 131.8
FF:10379-105H1 89 years, female 51.9

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