Tissue expression of OPALIN - Staining in cerebral cortex

CEREBRAL CORTEX - Expression summary

Protein expression

RNA expression

HPA:	86.6	TPM
GTEx:	27.3	RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Low
Glial cells:	High
Neuronal cells:	Low
Neuropil:	Medium

Antibody staining	Antibody HPA014372
Endothelial cells	Low
Glial cells	High
Neuronal cells	Low
Neuropil	Medium

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	86.6

Male, age 5

Sample 1
TPM: 131.5

Female, age 40

Sample 2
TPM: 62.7

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

Male, age 70

Sample 3
TPM: 65.6

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	27.3

GTEx sample id

RPKM

Brain - Cortex

Brain - Cortex
RPKM: 29.6

Samples: 114

Max RPKM: 143.1
Min RPKM: 3.9
Std RPKM: 26.7
Median RPKM: 18.2

GTEX-13G51-3026-SM-5IJB8

143.1

GTEX-11GS4-3126-SM-5A5LH

107.2

GTEX-QVUS-2826-SM-3GADB

106.6

GTEX-13FHP-3026-SM-5IJBS

105.7

GTEX-12WSA-2926-SM-5EQ4D

102.0

GTEX-12ZZY-3026-SM-5GCOU

94.6

GTEX-QDT8-2926-SM-32PKC

92.6

GTEX-13FHO-3026-SM-5J1O9

79.5

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Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 24.8

Samples: 108

Max RPKM: 158.7
Min RPKM: 2.5
Std RPKM: 25.6
Median RPKM: 15

GTEX-ZE7O-0011-R10a-SM-57WAZ

158.7

GTEX-12WSA-0011-R10b-SM-5P9ET

112.7

GTEX-XMD1-0011-R10A-SM-4AT4A

102.9

GTEX-13FLW-0011-R10b-SM-5LZZF

97.4

GTEX-P44H-0011-R10A-SM-2XCEK

83.8

GTEX-12WSD-0011-R10b-SM-5GU79

82.4

GTEX-RVPU-0011-R10A-SM-2XCAH

81.5

GTEX-ZDXO-0011-R10a-SM-4WWD8

77.8

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CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue