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S100A6
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    TISSUE

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    CELL

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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:218.2TPM
GTEx:76.8RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glial cells:Not detected
Neuronal cells:Low
Neuropil:Not detected
 

Antibody staining

Antibody HPA007575

 

Antibody CAB002601

 

Antibody CAB040549

 

Endothelial cells

Medium   Medium   Low  

Glial cells

Not detected   Not detected   Not detected  

Neuronal cells

Low   Low   Low  

Neuropil

Not detected   Not detected   Low  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

218.2

N/A Male, age 5
Sample 1
TPM: 193.7
overview Female, age 40
Sample 2
TPM: 116.3
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 344.7
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

76.8

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 73.6
Samples: 114

Max RPKM: 196.7
Min RPKM: 38.3
Std RPKM: 24.3
Median RPKM: 68.7
GTEX-144FL-3026-SM-5O99C 196.7
GTEX-ZZPT-3026-SM-5GZXH 156.8
GTEX-132Q8-3026-SM-5PNVG 135.6
GTEX-X585-3026-SM-46MWF 133.0
GTEX-NPJ8-1526-SM-2D7VU 127.4
GTEX-13OVJ-2826-SM-5L3GW 125.7
GTEX-13JVG-3126-SM-5L3FH 119.7
GTEX-11OC5-0726-SM-5P9JK 118.0
GTEX-11WQK-3026-SM-5EQL6 115.6
GTEX-13NYS-3126-SM-5KLYV 113.0
GTEX-1192X-3126-SM-5N9BY 101.3
GTEX-X4XX-3026-SM-3NMB2 100.0
GTEX-WZTO-2926-SM-3NM9I 99.8
GTEX-ZE7O-3126-SM-5HL5X 98.0
GTEX-NPJ7-2726-SM-2I3FT 94.6
GTEX-ZVT3-3026-SM-5E43N 94.5
GTEX-12ZZX-2926-SM-5GCOQ 93.1
GTEX-145MG-3026-SM-5RQJA 92.2
GTEX-13X6K-2926-SM-5Q5D5 91.1
GTEX-13PVQ-3026-SM-5SI93 90.4
GTEX-Z93S-2926-SM-57WB9 88.0
GTEX-13NYC-2826-SM-5K7WR 87.9
GTEX-1399T-3026-SM-5KLZC 87.6
GTEX-ZAJG-3126-SM-5HL9J 84.1
GTEX-QVUS-2826-SM-3GADB 82.3
GTEX-11OF3-2926-SM-5HL78 81.8
GTEX-11ONC-2926-SM-5P9JM 81.6
GTEX-13JUV-2926-SM-5LZX7 80.8
GTEX-145LS-3126-SM-5Q5BY 80.2
GTEX-117XS-3026-SM-5N9CA 79.4
GTEX-11EMC-3226-SM-5EGKW 79.4
GTEX-QVJO-1426-SM-2S1QY 78.5
GTEX-11GSO-2926-SM-5HL73 78.1
GTEX-11DXY-3226-SM-5GIDE 77.7
GTEX-13SLX-3126-SM-5S2Q5 77.3
GTEX-13FHO-3026-SM-5J1O9 77.2
GTEX-13NYB-3026-SM-5IJD7 76.9
GTEX-13QIC-2926-SM-5J2NF 76.3
GTEX-12ZZW-2926-SM-5LZUP 75.7
GTEX-QDT8-2926-SM-32PKC 75.2
GTEX-12WSA-2926-SM-5EQ4D 74.8
GTEX-11GSP-3226-SM-5986O 74.4
GTEX-ZYFD-3026-SM-5E44C 74.3
GTEX-13OW8-2826-SM-5L3GC 74.0
GTEX-R55F-1326-SM-5S2V4 73.6
GTEX-139T8-1026-SM-5J2MC 72.8
GTEX-1117F-3226-SM-5N9CT 71.9
GTEX-11EI6-3026-SM-5GZZO 71.9
GTEX-13PL6-3126-SM-5LUAR 71.7
GTEX-13OW6-3026-SM-5J2MI 70.0
GTEX-XLM4-3026-SM-4AT6L 69.5
GTEX-11TTK-2926-SM-5PNYP 69.3
GTEX-12WSC-3026-SM-5GCNF 69.3
GTEX-Y8DK-0826-SM-4TT3T 69.3
GTEX-YJ89-3026-SM-5IFJI 69.2
GTEX-RU72-3026-SM-5SI7Y 68.8
GTEX-13VXU-2926-SM-5LU5C 68.7
GTEX-14BMV-3026-SM-5S2PQ 68.7
GTEX-PWO3-0926-SM-2I5EY 67.6
GTEX-WVLH-3026-SM-3MJG9 67.6
GTEX-131YS-3126-SM-5KLYT 67.3
GTEX-11PRG-2926-SM-5987A 67.2
GTEX-12ZZY-3026-SM-5GCOU 67.0
GTEX-145MH-3026-SM-5Q5DZ 66.1
GTEX-13X6J-3026-SM-5Q5CU 65.9
GTEX-WHSE-3026-SM-3P5ZH 65.9
GTEX-13FXS-3126-SM-5J2NN 65.6
GTEX-12ZZZ-3026-SM-5BC67 65.2
GTEX-12126-1026-SM-5P9JJ 65.1
GTEX-13O3O-3126-SM-5KM3H 64.6
GTEX-13S7M-3126-SM-5RQJQ 64.6
GTEX-Y111-2726-SM-4TT3N 64.6
GTEX-13OVH-3026-SM-5MR4N 63.9
GTEX-11NUK-2926-SM-5A5MD 63.4
GTEX-13O3Q-2926-SM-5KM45 62.9
GTEX-N7MT-1126-SM-5SI7V 62.9
GTEX-WL46-2926-SM-3LK82 62.9
GTEX-145MF-2726-SM-5O995 62.8
GTEX-131XW-3126-SM-5LZUC 62.7
GTEX-13IVO-2926-SM-5L3CZ 62.3
GTEX-T5JC-2426-SM-3NMDB 61.6
GTEX-1128S-2726-SM-5H12C 60.6
GTEX-OXRN-2426-SM-2I5EQ 60.5
GTEX-12WSH-3026-SM-5CVNI 59.1
GTEX-11NV4-2126-SM-5N9DS 58.7
GTEX-14A5I-2926-SM-5Q5CQ 58.5
GTEX-ZAK1-3026-SM-5S2MJ 58.4
GTEX-11DXW-1126-SM-5H12Q 58.2
GTEX-XOTO-3026-SM-4B65M 58.2
GTEX-UTHO-3026-SM-3GAFB 57.9
GTEX-14ASI-3026-SM-5S2PN 57.8
GTEX-11GS4-3126-SM-5A5LH 57.7
GTEX-12WSD-3126-SM-5HL7P 57.3
GTEX-1445S-3026-SM-5O9BR 57.0
GTEX-13FLW-1426-SM-5K7YE 56.9
GTEX-WWYW-3126-SM-3NB39 54.8
GTEX-144GL-3026-SM-5Q5CW 54.3
GTEX-T6MN-2626-SM-32PMQ 54.2
GTEX-YFC4-3126-SM-5PNV6 53.3
GTEX-Q2AG-2926-SM-2HMJ3 52.2
GTEX-11ZUS-2926-SM-5FQSL 52.0
GTEX-1313W-3126-SM-5LZUI 51.8
GTEX-ZUA1-3026-SM-59HJC 51.0
GTEX-13FHP-3026-SM-5IJBS 47.8
GTEX-13G51-3026-SM-5IJB8 47.8
GTEX-13OW7-3026-SM-5L3GY 46.5
GTEX-147GR-3026-SM-5S2ML 46.5
GTEX-111FC-3126-SM-5GZZ2 46.2
GTEX-RNOR-2326-SM-2TF4I 42.4
GTEX-TSE9-3026-SM-3DB76 40.5
GTEX-T2IS-3026-SM-32QPM 40.1
GTEX-PVOW-2526-SM-2XCF7 38.9
GTEX-11O72-2926-SM-5BC4V 38.5
GTEX-QMR6-1426-SM-32PLA 38.3
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 80.2
Samples: 108

Max RPKM: 192.9
Min RPKM: 41.6
Std RPKM: 26.7
Median RPKM: 76.8
GTEX-11ZUS-0011-R10b-SM-5BC79 192.9
GTEX-13NYS-0011-R10a-SM-5MR4S 188.9
GTEX-X4EP-0011-R10B-SM-4QASJ 146.6
GTEX-132Q8-0011-R10b-SM-5DUWZ 146.0
GTEX-13N2G-0011-R10a-SM-5MR34 134.4
GTEX-13JVG-0011-R10b-SM-5KM2P 133.9
GTEX-12ZZY-0011-R10b-SM-5HL7W 125.5
GTEX-NPJ8-0011-R10A-SM-2YUMO 123.0
GTEX-12WSA-0011-R10b-SM-5P9ET 118.6
GTEX-Z93S-0011-R10a-SM-4RGNM 112.0
GTEX-NL4W-0011-R10A-SM-2I3DY 111.4
GTEX-13SLX-0011-R10a-SM-5P9HV 108.0
GTEX-XMD1-0011-R10A-SM-4AT4A 107.2
GTEX-13X6I-0011-R10a-SM-5PNWI 105.5
GTEX-13OW6-0011-R10a-SM-5L3HE 102.9
GTEX-11WQK-0011-R10a-SM-5BC6R 101.6
GTEX-X261-0011-R10B-SM-4E3JT 101.3
GTEX-12ZZX-0011-R10b-SM-5DUWK 100.6
GTEX-12WSD-0011-R10b-SM-5GU79 99.0
GTEX-13X6K-0011-R10a-SM-5P9JR 98.7
GTEX-XLM4-0011-R10A-SM-4AT5P 96.5
GTEX-13OVJ-0011-R10b-SM-5L3HT 95.0
GTEX-13O3O-0011-R10a-SM-5LUA9 94.7
GTEX-145MG-0011-R10a-SM-5PNWG 93.8
GTEX-13QJC-0011-R10a-SM-5SI63 93.7
GTEX-139TS-0011-R10a-SM-5K7TU 92.7
GTEX-N7MT-0011-R10A-SM-2I3E1 91.3
GTEX-ZVT3-0011-R10b-SM-57WB6 89.7
GTEX-NPJ7-0011-R10A-SM-2I3E5 89.6
GTEX-12WSF-0011-R10a-SM-5LZVH 89.4
GTEX-13SLW-0011-R10a-SM-5S2UI 89.4
GTEX-13NYB-0011-R10a-SM-5KM43 88.9
GTEX-147GR-0011-R10b-SM-5S2UM 88.9
GTEX-12WSC-0011-R10a-SM-5GU57 87.8
GTEX-14BIL-0011-R10a-SM-5SI75 85.3
GTEX-13OW7-0011-R10a-SM-5L3H3 85.2
GTEX-14BIN-0011-R10a-SM-5S2UA 84.8
GTEX-11H98-0011-R10b-SM-5NQ98 83.0
GTEX-13N1W-0011-R10b-SM-5MR4H 82.5
GTEX-13RTJ-0011-R10b-SM-5O9CW 82.3
GTEX-12ZZZ-0011-R10a-SM-5P9HC 81.4
GTEX-13O3Q-0011-R10b-SM-5KM39 79.3
GTEX-ZAB4-0011-R10a-SM-4SOKH 79.2
GTEX-ZDXO-0011-R10a-SM-4WWD8 78.8
GTEX-ZE7O-0011-R10a-SM-57WAZ 78.7
GTEX-14ASI-0011-R10b-SM-5S2VZ 78.2
GTEX-P44H-0011-R10A-SM-2XCEK 78.1
GTEX-ZVZQ-0011-R10b-SM-51MRT 78.0
GTEX-131YS-0011-R10b-SM-5EQ5N 77.9
GTEX-ZF28-0011-R10a-SM-4WWEH 77.9
GTEX-13X6J-0011-R10b-SM-5PNWA 77.7
GTEX-RVPU-0011-R10A-SM-2XCAH 77.4
GTEX-145LS-0011-R10a-SM-5PNUQ 77.3
GTEX-13S7M-0011-R10b-SM-5PNZB 77.2
GTEX-12ZZW-0011-R10b-SM-5HL9X 76.4
GTEX-131XH-0011-R10a-SM-5EGLJ 75.9
GTEX-1313W-0011-R10b-SM-5DUXA 75.5
GTEX-13QIC-0011-R10a-SM-5O9C7 75.5
GTEX-X4XX-0011-R10B-SM-46MWO 75.5
GTEX-1445S-0011-R10a-SM-5PNWB 74.3
GTEX-147F4-0011-R10b-SM-5S2WC 73.1
GTEX-N7MS-0011-R10A-SM-2HMJK 73.1
GTEX-T5JC-0011-R10A-SM-32PM2 72.8
GTEX-12WSM-0011-R10a-SM-5DUWV 71.3
GTEX-ZUA1-0011-R10a-SM-51MT6 71.1
GTEX-13FTZ-0011-R10b-SM-5KLZS 70.8
GTEX-YJ89-0011-R10a-SM-4SOK9 70.6
GTEX-13FXS-0011-R10a-SM-5J2MA 69.9
GTEX-Y8DK-0011-R10A-SM-4SOK1 69.9
GTEX-13JUV-0011-R10b-SM-5LZXR 69.7
GTEX-11GSP-0011-R10a-SM-5NQ7J 69.2
GTEX-13FHO-0011-R10b-SM-5J2MM 69.0
GTEX-NL3H-0011-R10A-SM-2I3E9 69.0
GTEX-13OW8-0011-R10a-SM-5L3H6 68.9
GTEX-145MH-0011-R10b-SM-5PNUK 67.5
GTEX-X585-0011-R10A-SM-46MUY 65.8
GTEX-WL46-0011-R10A-SM-3MJFQ 65.3
GTEX-13OVL-0011-R10a-SM-5L3GS 63.9
GTEX-11WQC-0011-R10a-SM-57WCT 63.6
GTEX-12WSH-0011-R10a-SM-5LZUS 63.6
GTEX-13FLV-0011-R10b-SM-5LZZ2 61.8
GTEX-145LU-0011-R10a-SM-5PNWJ 60.9
GTEX-13CZV-0011-R10b-SM-5LZYD 59.4
GTEX-ZXG5-0011-R10a-SM-57WDD 59.4
GTEX-13NZA-0011-R10b-SM-5KM54 59.2
GTEX-OXRN-0011-R10A-SM-2I5GC 59.0
GTEX-1477Z-0011-R10b-SM-5S2RF 58.5
GTEX-WZTO-0011-R10B-SM-4E3KB 57.6
GTEX-T6MN-0011-R10A-SM-32QP7 57.2
GTEX-QVUS-0011-R10A-SM-3GIK3 55.8
GTEX-QMR6-0011-R10A-SM-32PKO 55.6
GTEX-13FLW-0011-R10b-SM-5LZZF 55.4
GTEX-13G51-0011-R10b-SM-5LZYF 54.8
GTEX-WWYW-0011-R10A-SM-3NB35 54.5
GTEX-12WSE-0011-R10b-SM-5P9JV 53.6
GTEX-WVLH-0011-R10A-SM-3MJFM 53.5
GTEX-12126-0011-R10b-SM-5BC6T 53.3
GTEX-S7SE-0011-R10A-SM-2XCDF 53.0
GTEX-ZV68-0011-R10a-SM-51MT7 53.0
GTEX-YFC4-0011-R10a-SM-4SOK5 51.5
GTEX-131XW-0011-R10a-SM-5DUVA 49.3
GTEX-QVJO-0011-R10A-SM-2S1QJ 46.8
GTEX-TSE9-0011-R10A-SM-3DB7O 46.8
GTEX-Q2AG-0011-R10A-SM-2HMLA 46.3
GTEX-14753-0011-R10b-SM-5S2WE 44.7
GTEX-OXRO-0011-R10A-SM-2I5EH 43.6
GTEX-QDT8-0011-R10A-SM-32PKG 43.4
GTEX-13IVO-0011-R10a-SM-5LZY3 41.6
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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