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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:1106.8TPM
GTEx:167.0RPKM
FANTOM5:20.5Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA003403

 

Glandular cells

Medium  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

1106.8

overview Male, age 65
Sample 1
TPM: 1254.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 1064.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 1192.3
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 915.9

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

167.0

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 167.0
Samples: 88

Max RPKM: 349.2
Min RPKM: 59.2
Std RPKM: 53.5
Median RPKM: 160.5
GTEX-148VJ-2226-SM-5NQ9M 349.2
GTEX-WRHK-1026-SM-4MVOD 299.9
GTEX-Y5LM-1626-SM-4VDTB 281.3
GTEX-ZC5H-2326-SM-4WAYT 255.4
GTEX-1399U-2126-SM-5IFEZ 253.8
GTEX-11VI4-1626-SM-5EQKO 250.3
GTEX-11P82-0826-SM-5P9GU 243.5
GTEX-X15G-1426-SM-4PQZK 241.0
GTEX-UPK5-2026-SM-4JBIM 238.8
GTEX-13O61-1326-SM-5KM31 238.6
GTEX-WFG8-1626-SM-4LVMB 234.0
GTEX-13RTK-0826-SM-5Q5C6 229.0
GTEX-145ME-0926-SM-5O9AR 227.1
GTEX-11XUK-1426-SM-5EQMG 225.2
GTEX-1192X-2526-SM-59868 221.4
GTEX-13FH7-1226-SM-5IJFK 220.0
GTEX-VUSG-1726-SM-4KKZL 215.8
GTEX-13111-1426-SM-5DUW3 214.8
GTEX-13QBU-1926-SM-5IJEW 213.5
GTEX-VJYA-0926-SM-4KL1N 207.5
GTEX-WH7G-1626-SM-4LVMY 206.5
GTEX-11NSD-1726-SM-5N9C3 205.9
GTEX-ZTPG-2626-SM-57WFX 204.0
GTEX-ZLFU-1526-SM-4WWBT 203.1
GTEX-117YX-0326-SM-5GICL 196.3
GTEX-ZP4G-1626-SM-57WGD 193.2
GTEX-Y3IK-1726-SM-4YCCR 192.7
GTEX-XMK1-1826-SM-4B66F 190.3
GTEX-139YR-2226-SM-5IFFW 190.0
GTEX-131XG-1726-SM-5LZUR 181.5
GTEX-ZVP2-1726-SM-5GU5P 178.8
GTEX-ZXES-1526-SM-5NQ95 178.7
GTEX-139T6-1026-SM-5IJGC 178.6
GTEX-12BJ1-1926-SM-5HL9Z 176.9
GTEX-WFG7-1726-SM-4LVME 175.9
GTEX-13OVI-1926-SM-5IJCG 174.1
GTEX-ZYWO-1526-SM-5SIAL 173.4
GTEX-WFJO-0926-SM-4LVM2 170.7
GTEX-ZQG8-2526-SM-57WEQ 166.6
GTEX-Z9EW-0926-SM-5CVMM 166.4
GTEX-XGQ4-1326-SM-4GIDU 164.7
GTEX-ZA64-1226-SM-5HL7B 164.6
GTEX-ZVT2-2126-SM-5NQ93 162.4
GTEX-14E6E-1626-SM-5RQI7 161.6
GTEX-WEY5-1526-SM-4LMJF 159.5
GTEX-12WSK-1526-SM-5CVNO 156.7
GTEX-111CU-1326-SM-5NQ8L 154.7
GTEX-ZPIC-2326-SM-57WDW 154.2
GTEX-ZEX8-1826-SM-57WBH 152.9
GTEX-13O21-1026-SM-5IJDU 152.9
GTEX-13113-1226-SM-5EGHT 152.7
GTEX-Y114-1426-SM-4TT6W 150.3
GTEX-11P7K-1626-SM-5GU63 144.6
GTEX-131XF-1326-SM-5GCMQ 143.3
GTEX-11DXZ-1326-SM-5H11X 143.0
GTEX-13CF3-1226-SM-5LZXN 141.9
GTEX-ZQUD-0926-SM-57WE3 141.1
GTEX-ZZ64-0526-SM-5GZXM 141.1
GTEX-ZYFG-2026-SM-5E43Y 141.0
GTEX-1399S-2026-SM-5KM4B 137.7
GTEX-ZF2S-1726-SM-57WFT 137.3
GTEX-XXEK-1026-SM-4BRUW 135.8
GTEX-X5EB-1626-SM-4E3IV 135.0
GTEX-145LT-1026-SM-5LU9O 133.6
GTEX-XBED-1426-SM-4AT4G 132.9
GTEX-1399R-2026-SM-5K7WN 132.6
GTEX-XAJ8-0526-SM-47JYK 129.0
GTEX-14DAR-1426-SM-5RQIR 128.2
GTEX-133LE-1426-SM-5IFH1 128.0
GTEX-11I78-1126-SM-5A5K5 126.0
GTEX-XUZC-1426-SM-4BRV3 121.2
GTEX-YEC4-1726-SM-4W21E 118.7
GTEX-11DXX-1626-SM-5H11H 115.2
GTEX-YB5E-1526-SM-5IFIE 111.6
GTEX-13D11-0726-SM-5LZZB 110.6
GTEX-13FTW-2026-SM-5IJE2 108.7
GTEX-ZLV1-1126-SM-4WWBW 108.4
GTEX-ZTX8-0526-SM-59HLD 108.3
GTEX-11EQ9-1326-SM-5985X 106.8
GTEX-13PL7-2626-SM-5IFH4 102.0
GTEX-WQUQ-2426-SM-4MVNW 97.3
GTEX-1122O-1326-SM-5H11F 93.7
GTEX-Y9LG-1626-SM-5IFHM 91.4
GTEX-ZVZP-1826-SM-5GZXB 90.6
GTEX-YF7O-1826-SM-5IFIU 88.2
GTEX-ZPCL-1726-SM-57WEO 80.2
GTEX-ZTSS-0926-SM-59865 78.9
GTEX-111YS-1426-SM-5GID8 59.2
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

20.5

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 20.5
FF:10024-101D6 15,40,85 years, mixed 20.5

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The Human Protein Atlas project is funded
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