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Gene name

Class

Subclass

Chromosome

External id

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Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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ANTIBODY INFORMATION VALIDATION SUMMARY IMMUNOCYTOCHEMISTRY IMMUNOHISTOCHEMISTRY WESTERN BLOT PROTEIN ARRAY ANTIGEN INFORMATION RELEVANT PUBLICATIONS

ANTIBODY INFORMATION

 
 

Antibody HPA003267

 

Antibody HPA003326

 

Antibody CAB004352

 

Provider

Atlas Antibodies
Sigma-Aldrich
  Atlas Antibodies
Sigma-Aldrich
  Santa Cruz Biotechnology
 

Product name

HPA003267   HPA003326   sc-25272  

Host species

Rabbit   Rabbit   Mouse  

Clonality

pAb   pAb   mAb  

Purity

Affinity purified using the PrEST-antigen as affinity ligand   Affinity purified using the PrEST-antigen as affinity ligand   Protein A/G  

Other gene match

     

Released in version

3   3   2  

References

     

VALIDATION SUMMARY

 
 

Antibody HPA003267

 

Antibody HPA003326

 

Antibody CAB004352

 
Immunocytochemistry

Approved   Approved    
Immunohistochemistry


Validated

Validated
 

Validated

Validated
  Supported  
Western blot

Supported   Supported   Uncertain  
Protein array

Approved   Supported    

IMMUNOCYTOCHEMISTRY

 
 

Antibody HPA003267

 

Antibody HPA003326

 

Antibody CAB004352

 

Standard validation

Approved   Approved    

     

Figure description

Immunofluorescent staining of human cell line U-251 MG shows localization to plasma membrane & cytosol.   Immunofluorescent staining of human cell line U-251 MG shows localization to plasma membrane & cytosol.    

Antibody dilution

1:7   1:95    

Literature conformity

The subcellular location is partly supported by literature or no literature is available.   The subcellular location is partly supported by literature or no literature is available.    

IMMUNOHISTOCHEMISTRY

 
 

Antibody HPA003267

 

Antibody HPA003326

 

Antibody CAB004352

 

Formal validation: Orthogonal

Validated

Pearson correlation >0.6 for protein and RNA expression in cell lines.
 
Validated

Pearson correlation >0.6 for protein and RNA expression in cell lines.
   

 

 

 
 

 

   

Figure description

Distribution of protein expression (antibody staining) and RNA expression (TPM) across 44 cell lines.   Distribution of protein expression (antibody staining) and RNA expression (TPM) across 43 cell lines.    
 

Formal validation: Independent

Validated

Pearson correlation >0.6 for protein expression in cell lines using independent antibodies.
 
Validated

Pearson correlation >0.6 for protein expression in cell lines using independent antibodies.
   

 

 
 

   

Figure description

Distribution of protein expression (antibody staining).
Pearson correlation with HPA003326 across 45 cell lines.
  Distribution of protein expression (antibody staining).
Pearson correlation with HPA003267 across 45 cell lines.
   
 

Formal validation: Independent

Validated

Spearman correlation >0.6 for protein expression in tissues using independent antibodies.
 
Validated

Spearman correlation >0.6 for protein expression in tissues using independent antibodies.
   

 

 
 

   

Figure description

Distribution of protein expression (antibody staining).
Spearman correlation with HPA003326 across 67 cell types.
  Distribution of protein expression (antibody staining).
Spearman correlation with HPA003267 across 67 cell types.
   
 

Standard validation

Supported   Supported   Supported  

     

Figure description

Immunohistochemical staining of human placenta shows strong cytoplasmic positivity in trophoblastic cells.   Immunohistochemical staining of human placenta shows strong cytoplasmic positivity in trophoblastic cells.   Immunohistochemical staining of human placenta shows strong cytoplasmic positivity in trophoblastic cells.  

Expression

RNA: detected in 37 tissues
Protein: detected in 50 cell types
  RNA: detected in 37 tissues
Protein: detected in 57 cell types
  RNA: detected in 37 tissues
Protein: detected in 55 cell types
 

Retrieval

HIER pH6   HIER pH6   HIER pH6  

Antibody dilution

1:50   1:300   1:200  

Literature conformity

Consistent with extensive gene/protein characterization data.   Consistent with extensive gene/protein characterization data.   Consistent with extensive gene/protein characterization data.  

RNA consistency

Consistent with RNA expression data.   Consistent with RNA expression data.   Consistent with RNA expression data.  

WESTERN BLOT

 
 

Antibody HPA003267

 

Antibody HPA003326

 

Antibody CAB004352

 

Standard validation

Supported

Analysis performed using a standard panel of samples.
Band of predicted size in kDa (+/-20%) with additional bands present.
  Supported

Analysis performed using a standard panel of samples.
Band of predicted size in kDa (+/-20%) with additional bands present.
  Uncertain

Analysis performed using a standard panel of samples.
Only bands not corresponding to the predicted size.
 

     

Figure description

Lane 1: Marker [kDa] 220, 112, 84, 47, 32, 26, 16.8
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
  Lane 1: Marker [kDa] 230, 110, 82, 49.3, 32.2, 25.5, 17.6
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
   

Target mass (kDa)

71.5   71.5   71.5  

Antibody dilution

1:250   1:250   1:500  

PROTEIN ARRAY

 
 

Antibody HPA003267

 

Antibody HPA003326

 

Antibody CAB004352

 

Standard validation

Approved

Pass with quality comment low specificity (binding to 1-2 PrESTs >15% and <40%).
  Supported

Pass with single peak corresponding to interaction only with its own antigen.
   

     

Figure description

Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.   Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.    

Antibody dilution

1:2000   1:3000    

ANTIGEN INFORMATION

 
 

Antibody HPA003267

 

Antibody HPA003326

 

Antibody CAB004352

 

Antigen

Recombinant protein fragment   Recombinant protein fragment   Recombinant protein  

Length (aa)

127   150    

Antigen sequence

WSGTLNNKLGLFPSNFVKELEVTDDGETHEAQDDSETVLAGPTSPIPSLG
NVSETASGSVTQPKKIRGIGFGDIFKEGSVKLRTRTSSSETEEKKPEKPL
ILQSLGPKTQSVEITKTDTEGKIKAKE
 
VDFDSLTVRTSKETDVVNFDDIASSENLLHLTANRPKMPGRRLPGRFNGG
HSPTHSPEKILKLPKEEDSANLKPSELKKDTCYSPKPSVYLSTPSSASKA
NTTAFLTPLEIKAKVETDDVKKNSLDELRAQIIELLCIVEALKKDHGKEL
   

Matching transcripts

CD2AP-001 - ENSP00000352264 [100%]
  CD2AP-001 - ENSP00000352264 [100%]
   

Other gene match

     
ANTIGEN VIEW
CD2AP-001
 

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