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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:29.1RPKM
FANTOM5:34.7Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Medium
 

Antibody staining

Antibody HPA045951

 

Glial cells

Not detected  

Neuronal cells

Medium  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

29.1

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 29.1
Samples: 117

Max RPKM: 49.7
Min RPKM: 11.7
Std RPKM: 7.5
Median RPKM: 29.5
GTEX-139TT-0011-R5b-SM-5K7W8 49.7
GTEX-12WSA-0011-R5b-SM-5GU5I 47.2
GTEX-ZUA1-0011-R5b-SM-51MTG 41.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 40.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 40.6
GTEX-131YS-0011-R5b-SM-5K7YB 40.2
GTEX-13G51-0011-R5a-SM-5L3EB 40.2
GTEX-11H98-0011-R5b-SM-57WCF 39.8
GTEX-T6MN-0011-R5A-SM-32QPD 39.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 39.2
GTEX-1399T-0011-R5b-SM-5IJDK 37.8
GTEX-132Q8-0011-R5a-SM-5IJDM 37.5
GTEX-X585-0011-R5A-SM-46MVI 37.3
GTEX-1313W-0011-R5b-SM-5L3EP 37.1
GTEX-145MH-0011-R5a-SM-5P9JT 36.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 36.6
GTEX-11GSP-0011-R5a-SM-57WBE 36.5
GTEX-13X6K-0011-R5b-SM-5PNUE 36.5
GTEX-12WSC-0011-R5b-SM-5CVNS 36.3
GTEX-13X6J-0011-R5b-SM-5PNWT 36.0
GTEX-13VXU-0011-R5a-SM-5O9D7 35.9
GTEX-N7MS-0011-R5a-SM-2HMK8 35.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 35.7
GTEX-S7SE-0011-R5A-SM-2XCDA 35.7
GTEX-14BIM-0011-R5b-SM-5S2RM 35.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 35.6
GTEX-QVJO-0011-R5A-SM-2S1QM 35.1
GTEX-WWYW-0011-R5A-SM-3NB3E 35.1
GTEX-13SLX-0011-R5a-SM-5O9BV 34.8
GTEX-13JUV-0011-R5a-SM-5LZY5 34.3
GTEX-145LS-0011-R5a-SM-5SI65 34.3
GTEX-12WSB-0011-R5b-SM-5GU67 34.2
GTEX-WVLH-0011-R5A-SM-3MJFW 33.9
GTEX-N7MT-0011-R5a-SM-2I3G6 33.8
GTEX-T5JC-0011-R5A-SM-32PLK 33.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 33.3
GTEX-13X6I-0011-R5a-SM-5PNWW 33.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 33.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 33.1
GTEX-WZTO-0011-R5B-SM-3NMC5 32.9
GTEX-11NV4-0011-R5a-SM-5NQ88 32.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 32.7
GTEX-P44H-0011-R5A-SM-2XCEX 32.6
GTEX-13OW6-0011-R5a-SM-5O9BK 32.4
GTEX-R55E-0011-R5A-SM-2TC5N 32.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 32.1
GTEX-11OF3-0011-R5a-SM-57WB4 32.0
GTEX-13FLV-0011-R5a-SM-5LZWT 31.7
GTEX-13FXS-0011-R5b-SM-5LZYE 31.7
GTEX-13JVG-0011-R5a-SM-5MR4O 31.7
GTEX-13NYS-0011-R5a-SM-5MR4D 31.7
GTEX-13FLW-0011-R5a-SM-5LZX6 31.6
GTEX-WL46-0011-R5A-SM-3LK6V 30.7
GTEX-13CZV-0011-R5a-SM-5K7XA 30.6
GTEX-13NYB-0011-R5a-SM-5MR45 30.4
GTEX-13OVH-0011-R5b-SM-5KM4L 30.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 30.2
GTEX-14ABY-0011-R5b-SM-5SI7B 30.1
GTEX-NL4W-0011-R5a-SM-2I3GD 29.5
GTEX-RU72-0011-R5A-SM-2TF6U 29.5
GTEX-12WSF-0011-R5a-SM-5HL8K 29.4
GTEX-13OW7-0011-R5b-SM-5O9DM 29.4
GTEX-OHPN-0011-R5A-SM-2I5FF 29.3
GTEX-UTHO-0011-R5A-SM-3GIJD 29.3
GTEX-TSE9-0011-R5A-SM-3DB7J 29.2
GTEX-13OVL-0011-R5b-SM-5L3FU 29.0
GTEX-WHSE-0011-R5A-SM-3P5ZO 28.9
GTEX-13O3O-0011-R5b-SM-5KM44 28.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 28.1
GTEX-13OW5-0011-R5b-SM-5L3FR 28.1
GTEX-13S7M-0011-R5b-SM-5P9HS 27.9
GTEX-XMD1-0011-R5A-SM-4AT47 27.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 27.3
GTEX-X4XX-0011-R5A-SM-46MWN 27.2
GTEX-RVPV-0011-R5A-SM-2TF69 27.1
GTEX-XOTO-0011-R5A-SM-4B657 26.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 26.7
GTEX-NL3H-0011-R5a-SM-2I3GB 25.7
GTEX-PVOW-0011-R5A-SM-32PL7 25.6
GTEX-12ZZX-0011-R5a-SM-5HL89 25.2
GTEX-RVPU-0011-R5A-SM-2XCAD 25.2
GTEX-YFC4-0011-R5a-SM-4RGLR 25.2
GTEX-ZE7O-0011-R5a-SM-57WBO 25.0
GTEX-13CIG-0011-R5b-SM-5L3F2 24.9
GTEX-T2IS-0011-R5A-SM-32QP4 24.7
GTEX-12WSD-0011-R5b-SM-5CVNG 24.6
GTEX-144GO-0011-R5a-SM-5PNUR 24.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 24.0
GTEX-X261-0011-R5A-SM-3NMB4 23.8
GTEX-ZXG5-0011-R5b-SM-57WBN 23.7
GTEX-139T8-0011-R5b-SM-5J1MO 23.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 23.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 22.9
GTEX-Z93S-0011-R5b-SM-4RGNI 22.7
GTEX-NPJ7-0011-R5a-SM-33HBK 21.4
GTEX-QMR6-0011-R5A-SM-32PKT 20.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 20.7
GTEX-1445S-0011-R5a-SM-5PNUS 20.7
GTEX-139TS-0011-R5b-SM-5J2MZ 20.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 20.3
GTEX-ZVT3-0011-R5a-SM-51MSI 20.2
GTEX-14BIN-0011-R5b-SM-5SI78 19.9
GTEX-11WQC-0011-R5a-SM-5BC74 19.1
GTEX-13112-0011-R5b-SM-5DUV8 19.0
GTEX-144GL-0011-R5b-SM-5PNUJ 18.8
GTEX-OXRN-0011-R5A-SM-2I5EF 18.4
GTEX-12WSH-0011-R5b-SM-5P9F3 18.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 18.2
GTEX-YJ89-0011-R5a-SM-4V6GM 17.8
GTEX-ZV68-0011-R5a-SM-4YCDW 17.5
GTEX-11UD1-0011-R5b-SM-5P9FP 17.1
GTEX-13CF2-0011-R5a-SM-5LZWS 15.4
GTEX-13FHP-0011-R5b-SM-5LZY2 14.4
GTEX-1477Z-0011-R5b-SM-5PNUO 14.0
GTEX-S7PM-0011-R5A-SM-3NM8G 13.6
GTEX-13NZA-0011-R5b-SM-5KM4K 13.0
GTEX-145MG-0011-R5b-SM-5S2VU 11.7
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

34.7

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 34.7
FF:10164-103B2 76 years, female 44.3
FF:10379-105H1 89 years, female 25.2

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