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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:91.9TPM
GTEx:38.7RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:Low
Neuronal cells:Medium
Neuropil:Low
 

Antibody staining

Antibody HPA045951

 

Endothelial cells

Low  

Glial cells

Low  

Neuronal cells

Medium  

Neuropil

Low  
 
 

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

91.9

N/A Male, age 5
Sample 1
TPM: 89.3
overview Female, age 40
Sample 2
TPM: 96.3
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 90.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

38.7

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 39.0
Samples: 114

Max RPKM: 53.9
Min RPKM: 20.1
Std RPKM: 7.2
Median RPKM: 40.2
GTEX-13SLX-3126-SM-5S2Q5 53.9
GTEX-WVLH-3026-SM-3MJG9 52.4
GTEX-117XS-3026-SM-5N9CA 52.1
GTEX-14BMV-3026-SM-5S2PQ 51.6
GTEX-13VXU-2926-SM-5LU5C 50.6
GTEX-X585-3026-SM-46MWF 50.5
GTEX-ZYFD-3026-SM-5E44C 49.7
GTEX-YJ89-3026-SM-5IFJI 48.7
GTEX-13FXS-3126-SM-5J2NN 48.1
GTEX-11OC5-0726-SM-5P9JK 47.6
GTEX-11DXY-3226-SM-5GIDE 46.9
GTEX-13OW8-2826-SM-5L3GC 46.6
GTEX-145MG-3026-SM-5RQJA 46.6
GTEX-12ZZX-2926-SM-5GCOQ 46.3
GTEX-T6MN-2626-SM-32PMQ 46.3
GTEX-WL46-2926-SM-3LK82 46.1
GTEX-11GSO-2926-SM-5HL73 45.6
GTEX-14ASI-3026-SM-5S2PN 45.6
GTEX-131YS-3126-SM-5KLYT 45.5
GTEX-12WSC-3026-SM-5GCNF 45.4
GTEX-WHSE-3026-SM-3P5ZH 45.4
GTEX-WZTO-2926-SM-3NM9I 45.4
GTEX-X4XX-3026-SM-3NMB2 45.3
GTEX-11ONC-2926-SM-5P9JM 45.2
GTEX-T5JC-2426-SM-3NMDB 45.0
GTEX-1313W-3126-SM-5LZUI 44.7
GTEX-13OW6-3026-SM-5J2MI 44.7
GTEX-QVJO-1426-SM-2S1QY 44.6
GTEX-12ZZY-3026-SM-5GCOU 44.4
GTEX-13FLW-1426-SM-5K7YE 44.4
GTEX-1192X-3126-SM-5N9BY 44.2
GTEX-145LS-3126-SM-5Q5BY 43.8
GTEX-YFC4-3126-SM-5PNV6 43.5
GTEX-12126-1026-SM-5P9JJ 43.4
GTEX-13NYC-2826-SM-5K7WR 43.3
GTEX-XOTO-3026-SM-4B65M 43.3
GTEX-ZAK1-3026-SM-5S2MJ 43.3
GTEX-13FHO-3026-SM-5J1O9 43.1
GTEX-13QIC-2926-SM-5J2NF 43.0
GTEX-13O3Q-2926-SM-5KM45 42.9
GTEX-13NYB-3026-SM-5IJD7 42.5
GTEX-RNOR-2326-SM-2TF4I 42.5
GTEX-11NUK-2926-SM-5A5MD 42.4
GTEX-145MH-3026-SM-5Q5DZ 42.3
GTEX-T2IS-3026-SM-32QPM 42.3
GTEX-TSE9-3026-SM-3DB76 42.1
GTEX-XLM4-3026-SM-4AT6L 42.0
GTEX-1399T-3026-SM-5KLZC 41.9
GTEX-12ZZW-2926-SM-5LZUP 41.7
GTEX-ZZPT-3026-SM-5GZXH 41.7
GTEX-WWYW-3126-SM-3NB39 41.5
GTEX-145MF-2726-SM-5O995 41.3
GTEX-11PRG-2926-SM-5987A 41.2
GTEX-Y111-2726-SM-4TT3N 40.9
GTEX-Z93S-2926-SM-57WB9 40.8
GTEX-11DXW-1126-SM-5H12Q 40.6
GTEX-R55F-1326-SM-5S2V4 40.4
GTEX-ZE7O-3126-SM-5HL5X 40.1
GTEX-NPJ8-1526-SM-2D7VU 40.0
GTEX-ZUA1-3026-SM-59HJC 40.0
GTEX-Y8DK-0826-SM-4TT3T 39.9
GTEX-13O3O-3126-SM-5KM3H 39.8
GTEX-144FL-3026-SM-5O99C 39.4
GTEX-144GL-3026-SM-5Q5CW 39.2
GTEX-ZVT3-3026-SM-5E43N 38.6
GTEX-132Q8-3026-SM-5PNVG 38.4
GTEX-13OVH-3026-SM-5MR4N 38.2
GTEX-13NYS-3126-SM-5KLYV 37.7
GTEX-Q2AG-2926-SM-2HMJ3 37.7
GTEX-1128S-2726-SM-5H12C 37.6
GTEX-11ZUS-2926-SM-5FQSL 37.2
GTEX-RU72-3026-SM-5SI7Y 37.1
GTEX-13PL6-3126-SM-5LUAR 37.0
GTEX-QVUS-2826-SM-3GADB 37.0
GTEX-11GS4-3126-SM-5A5LH 36.8
GTEX-QDT8-2926-SM-32PKC 36.8
GTEX-14A5I-2926-SM-5Q5CQ 36.6
GTEX-13FHP-3026-SM-5IJBS 36.4
GTEX-11EI6-3026-SM-5GZZO 35.0
GTEX-131XW-3126-SM-5LZUC 34.8
GTEX-13S7M-3126-SM-5RQJQ 34.8
GTEX-11EMC-3226-SM-5EGKW 34.5
GTEX-QMR6-1426-SM-32PLA 34.5
GTEX-12WSH-3026-SM-5CVNI 34.3
GTEX-PVOW-2526-SM-2XCF7 34.1
GTEX-111FC-3126-SM-5GZZ2 33.8
GTEX-139T8-1026-SM-5J2MC 33.4
GTEX-13X6J-3026-SM-5Q5CU 33.2
GTEX-13JUV-2926-SM-5LZX7 32.9
GTEX-12ZZZ-3026-SM-5BC67 32.8
GTEX-NPJ7-2726-SM-2I3FT 32.7
GTEX-UTHO-3026-SM-3GAFB 32.6
GTEX-11NV4-2126-SM-5N9DS 32.3
GTEX-11OF3-2926-SM-5HL78 32.1
GTEX-13OVJ-2826-SM-5L3GW 32.0
GTEX-1117F-3226-SM-5N9CT 31.8
GTEX-13JVG-3126-SM-5L3FH 31.4
GTEX-ZAJG-3126-SM-5HL9J 31.3
GTEX-OXRN-2426-SM-2I5EQ 31.1
GTEX-13X6K-2926-SM-5Q5D5 30.7
GTEX-11GSP-3226-SM-5986O 30.3
GTEX-12WSD-3126-SM-5HL7P 29.2
GTEX-13G51-3026-SM-5IJB8 27.9
GTEX-13PVQ-3026-SM-5SI93 27.8
GTEX-N7MT-1126-SM-5SI7V 26.7
GTEX-11TTK-2926-SM-5PNYP 26.3
GTEX-12WSA-2926-SM-5EQ4D 26.3
GTEX-13OW7-3026-SM-5L3GY 25.6
GTEX-11WQK-3026-SM-5EQL6 25.4
GTEX-13IVO-2926-SM-5L3CZ 24.7
GTEX-147GR-3026-SM-5S2ML 24.0
GTEX-1445S-3026-SM-5O9BR 23.0
GTEX-PWO3-0926-SM-2I5EY 21.1
GTEX-11O72-2926-SM-5BC4V 20.1
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 38.4
Samples: 108

Max RPKM: 61.3
Min RPKM: 17.1
Std RPKM: 8.7
Median RPKM: 39.4
GTEX-12ZZY-0011-R10b-SM-5HL7W 61.3
GTEX-145MG-0011-R10a-SM-5PNWG 53.3
GTEX-14ASI-0011-R10b-SM-5S2VZ 52.2
GTEX-13NYS-0011-R10a-SM-5MR4S 50.7
GTEX-13O3Q-0011-R10b-SM-5KM39 50.4
GTEX-14BIN-0011-R10a-SM-5S2UA 49.6
GTEX-13X6K-0011-R10a-SM-5P9JR 49.5
GTEX-X585-0011-R10A-SM-46MUY 49.1
GTEX-13SLX-0011-R10a-SM-5P9HV 49.0
GTEX-13RTJ-0011-R10b-SM-5O9CW 48.9
GTEX-131XH-0011-R10a-SM-5EGLJ 48.1
GTEX-12WSC-0011-R10a-SM-5GU57 47.8
GTEX-12ZZX-0011-R10b-SM-5DUWK 47.7
GTEX-12WSE-0011-R10b-SM-5P9JV 47.5
GTEX-T6MN-0011-R10A-SM-32QP7 47.1
GTEX-131YS-0011-R10b-SM-5EQ5N 46.9
GTEX-NL3H-0011-R10A-SM-2I3E9 46.9
GTEX-ZVZQ-0011-R10b-SM-51MRT 46.7
GTEX-T5JC-0011-R10A-SM-32PM2 46.6
GTEX-147GR-0011-R10b-SM-5S2UM 46.4
GTEX-12WSF-0011-R10a-SM-5LZVH 46.1
GTEX-13O3O-0011-R10a-SM-5LUA9 45.9
GTEX-YFC4-0011-R10a-SM-4SOK5 45.8
GTEX-13S7M-0011-R10b-SM-5PNZB 45.7
GTEX-Y8DK-0011-R10A-SM-4SOK1 45.7
GTEX-X4XX-0011-R10B-SM-46MWO 45.6
GTEX-12ZZZ-0011-R10a-SM-5P9HC 45.4
GTEX-13X6J-0011-R10b-SM-5PNWA 45.4
GTEX-12WSM-0011-R10a-SM-5DUWV 45.3
GTEX-13OW7-0011-R10a-SM-5L3H3 45.3
GTEX-13QIC-0011-R10a-SM-5O9C7 44.9
GTEX-WVLH-0011-R10A-SM-3MJFM 44.4
GTEX-13N1W-0011-R10b-SM-5MR4H 44.3
GTEX-1313W-0011-R10b-SM-5DUXA 44.1
GTEX-13FHO-0011-R10b-SM-5J2MM 44.1
GTEX-XLM4-0011-R10A-SM-4AT5P 44.0
GTEX-145MH-0011-R10b-SM-5PNUK 43.9
GTEX-WZTO-0011-R10B-SM-4E3KB 43.9
GTEX-YJ89-0011-R10a-SM-4SOK9 43.9
GTEX-Q2AG-0011-R10A-SM-2HMLA 43.4
GTEX-13OW6-0011-R10a-SM-5L3HE 42.7
GTEX-132Q8-0011-R10b-SM-5DUWZ 42.3
GTEX-13FXS-0011-R10a-SM-5J2MA 42.3
GTEX-S7SE-0011-R10A-SM-2XCDF 42.1
GTEX-WL46-0011-R10A-SM-3MJFQ 41.5
GTEX-12WSD-0011-R10b-SM-5GU79 41.4
GTEX-145LS-0011-R10a-SM-5PNUQ 41.4
GTEX-N7MS-0011-R10A-SM-2HMJK 41.4
GTEX-ZF28-0011-R10a-SM-4WWEH 41.4
GTEX-13CZV-0011-R10b-SM-5LZYD 40.9
GTEX-X4EP-0011-R10B-SM-4QASJ 40.2
GTEX-13NYB-0011-R10a-SM-5KM43 40.1
GTEX-13X6I-0011-R10a-SM-5PNWI 39.7
GTEX-13OVL-0011-R10a-SM-5L3GS 39.5
GTEX-11H98-0011-R10b-SM-5NQ98 39.4
GTEX-14BIL-0011-R10a-SM-5SI75 39.4
GTEX-Z93S-0011-R10a-SM-4RGNM 39.4
GTEX-WWYW-0011-R10A-SM-3NB35 39.1
GTEX-QVJO-0011-R10A-SM-2S1QJ 38.9
GTEX-12WSH-0011-R10a-SM-5LZUS 38.8
GTEX-147F4-0011-R10b-SM-5S2WC 38.4
GTEX-ZUA1-0011-R10a-SM-51MT6 38.2
GTEX-N7MT-0011-R10A-SM-2I3E1 37.9
GTEX-NPJ8-0011-R10A-SM-2YUMO 37.9
GTEX-ZAB4-0011-R10a-SM-4SOKH 37.5
GTEX-ZDXO-0011-R10a-SM-4WWD8 37.0
GTEX-13JUV-0011-R10b-SM-5LZXR 36.4
GTEX-ZVT3-0011-R10b-SM-57WB6 36.1
GTEX-13QJC-0011-R10a-SM-5SI63 35.9
GTEX-13N2G-0011-R10a-SM-5MR34 35.8
GTEX-139TS-0011-R10a-SM-5K7TU 35.6
GTEX-13FLW-0011-R10b-SM-5LZZF 35.5
GTEX-13SLW-0011-R10a-SM-5S2UI 35.3
GTEX-13OW8-0011-R10a-SM-5L3H6 34.9
GTEX-NPJ7-0011-R10A-SM-2I3E5 34.3
GTEX-QMR6-0011-R10A-SM-32PKO 34.3
GTEX-12126-0011-R10b-SM-5BC6T 34.0
GTEX-TSE9-0011-R10A-SM-3DB7O 33.5
GTEX-QDT8-0011-R10A-SM-32PKG 32.9
GTEX-145LU-0011-R10a-SM-5PNWJ 32.8
GTEX-11WQC-0011-R10a-SM-57WCT 32.6
GTEX-13G51-0011-R10b-SM-5LZYF 32.6
GTEX-P44H-0011-R10A-SM-2XCEK 31.9
GTEX-13FLV-0011-R10b-SM-5LZZ2 31.3
GTEX-RVPU-0011-R10A-SM-2XCAH 31.3
GTEX-NL4W-0011-R10A-SM-2I3DY 31.2
GTEX-12WSA-0011-R10b-SM-5P9ET 30.7
GTEX-11ZUS-0011-R10b-SM-5BC79 30.1
GTEX-QVUS-0011-R10A-SM-3GIK3 29.4
GTEX-XMD1-0011-R10A-SM-4AT4A 29.4
GTEX-13OVJ-0011-R10b-SM-5L3HT 28.2
GTEX-13FTZ-0011-R10b-SM-5KLZS 27.8
GTEX-12ZZW-0011-R10b-SM-5HL9X 27.6
GTEX-OXRN-0011-R10A-SM-2I5GC 27.5
GTEX-11GSP-0011-R10a-SM-5NQ7J 26.9
GTEX-1445S-0011-R10a-SM-5PNWB 26.5
GTEX-ZXG5-0011-R10a-SM-57WDD 26.1
GTEX-13NZA-0011-R10b-SM-5KM54 24.9
GTEX-1477Z-0011-R10b-SM-5S2RF 24.6
GTEX-11WQK-0011-R10a-SM-5BC6R 24.0
GTEX-X261-0011-R10B-SM-4E3JT 23.9
GTEX-13JVG-0011-R10b-SM-5KM2P 23.1
GTEX-ZV68-0011-R10a-SM-51MT7 21.4
GTEX-ZE7O-0011-R10a-SM-57WAZ 20.7
GTEX-14753-0011-R10b-SM-5S2WE 20.4
GTEX-OXRO-0011-R10A-SM-2I5EH 19.6
GTEX-13IVO-0011-R10a-SM-5LZY3 17.9
GTEX-131XW-0011-R10a-SM-5DUVA 17.1
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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