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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:32.7TPM
GTEx:31.4RPKM
FANTOM5:52.0Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Not detected
 

Antibody staining

Antibody HPA040957

 

Antibody HPA043955

 

Antibody CAB000010

 

Antibody CAB072863

 

Antibody CAB072864

 

Glandular cells

Not detected   Not detected   Not detected   Not detected   Not detected  
         
         
         

SMALL INTESTINE - HPA RNA-seq

Average TPM

32.7

overview Male, age 65
Sample 1
TPM: 42.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 34.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 37.1
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 16.8

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

31.4

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 31.4
Samples: 88

Max RPKM: 123.1
Min RPKM: 0.4
Std RPKM: 23.2
Median RPKM: 24.2
GTEX-UPK5-2026-SM-4JBIM 123.1
GTEX-11NSD-1726-SM-5N9C3 91.3
GTEX-VUSG-1726-SM-4KKZL 83.6
GTEX-131XG-1726-SM-5LZUR 75.8
GTEX-WRHK-1026-SM-4MVOD 71.2
GTEX-13FH7-1226-SM-5IJFK 68.2
GTEX-WH7G-1626-SM-4LVMY 67.6
GTEX-X15G-1426-SM-4PQZK 67.0
GTEX-14E6E-1626-SM-5RQI7 64.8
GTEX-WFJO-0926-SM-4LVM2 64.3
GTEX-Z9EW-0926-SM-5CVMM 60.8
GTEX-11XUK-1426-SM-5EQMG 60.7
GTEX-1399U-2126-SM-5IFEZ 59.3
GTEX-13O61-1326-SM-5KM31 57.9
GTEX-ZLFU-1526-SM-4WWBT 56.9
GTEX-1399S-2026-SM-5KM4B 56.3
GTEX-11P82-0826-SM-5P9GU 55.6
GTEX-12BJ1-1926-SM-5HL9Z 53.5
GTEX-ZVP2-1726-SM-5GU5P 50.6
GTEX-ZEX8-1826-SM-57WBH 49.2
GTEX-145ME-0926-SM-5O9AR 45.9
GTEX-VJYA-0926-SM-4KL1N 44.3
GTEX-11VI4-1626-SM-5EQKO 44.2
GTEX-XAJ8-0526-SM-47JYK 42.7
GTEX-1399R-2026-SM-5K7WN 42.2
GTEX-ZP4G-1626-SM-57WGD 40.5
GTEX-11DXX-1626-SM-5H11H 40.3
GTEX-13QBU-1926-SM-5IJEW 38.9
GTEX-11EQ9-1326-SM-5985X 37.8
GTEX-ZQG8-2526-SM-57WEQ 37.4
GTEX-148VJ-2226-SM-5NQ9M 35.0
GTEX-11P7K-1626-SM-5GU63 33.3
GTEX-ZC5H-2326-SM-4WAYT 32.0
GTEX-ZZ64-0526-SM-5GZXM 31.0
GTEX-11I78-1126-SM-5A5K5 30.5
GTEX-XXEK-1026-SM-4BRUW 29.8
GTEX-13FTW-2026-SM-5IJE2 27.8
GTEX-X5EB-1626-SM-4E3IV 27.2
GTEX-XGQ4-1326-SM-4GIDU 26.7
GTEX-131XF-1326-SM-5GCMQ 26.2
GTEX-ZVT2-2126-SM-5NQ93 26.2
GTEX-13CF3-1226-SM-5LZXN 25.2
GTEX-ZYWO-1526-SM-5SIAL 24.6
GTEX-ZPIC-2326-SM-57WDW 24.3
GTEX-139YR-2226-SM-5IFFW 24.0
GTEX-WEY5-1526-SM-4LMJF 23.6
GTEX-ZVZP-1826-SM-5GZXB 23.5
GTEX-YEC4-1726-SM-4W21E 23.3
GTEX-11DXZ-1326-SM-5H11X 22.8
GTEX-13RTK-0826-SM-5Q5C6 22.3
GTEX-ZA64-1226-SM-5HL7B 22.3
GTEX-13D11-0726-SM-5LZZB 22.2
GTEX-13O21-1026-SM-5IJDU 21.8
GTEX-13111-1426-SM-5DUW3 21.5
GTEX-XBED-1426-SM-4AT4G 20.1
GTEX-139T6-1026-SM-5IJGC 19.4
GTEX-ZTPG-2626-SM-57WFX 19.3
GTEX-Y9LG-1626-SM-5IFHM 18.1
GTEX-XUZC-1426-SM-4BRV3 17.9
GTEX-145LT-1026-SM-5LU9O 17.3
GTEX-14DAR-1426-SM-5RQIR 17.1
GTEX-13PL7-2626-SM-5IFH4 16.4
GTEX-1122O-1326-SM-5H11F 16.4
GTEX-ZTSS-0926-SM-59865 15.9
GTEX-ZTX8-0526-SM-59HLD 15.8
GTEX-13113-1226-SM-5EGHT 14.3
GTEX-YF7O-1826-SM-5IFIU 13.5
GTEX-Y5LM-1626-SM-4VDTB 13.2
GTEX-ZYFG-2026-SM-5E43Y 12.8
GTEX-ZLV1-1126-SM-4WWBW 12.8
GTEX-YB5E-1526-SM-5IFIE 12.7
GTEX-ZXES-1526-SM-5NQ95 12.5
GTEX-WFG7-1726-SM-4LVME 11.6
GTEX-133LE-1426-SM-5IFH1 10.5
GTEX-Y114-1426-SM-4TT6W 10.4
GTEX-WQUQ-2426-SM-4MVNW 10.4
GTEX-ZPCL-1726-SM-57WEO 9.8
GTEX-WFG8-1626-SM-4LVMB 8.0
GTEX-111YS-1426-SM-5GID8 7.3
GTEX-Y3IK-1726-SM-4YCCR 6.2
GTEX-1192X-2526-SM-59868 5.8
GTEX-ZF2S-1726-SM-57WFT 5.0
GTEX-12WSK-1526-SM-5CVNO 4.9
GTEX-XMK1-1826-SM-4B66F 4.4
GTEX-117YX-0326-SM-5GICL 2.1
GTEX-111CU-1326-SM-5NQ8L 1.2
GTEX-ZQUD-0926-SM-57WE3 1.1
GTEX-13OVI-1926-SM-5IJCG 0.4
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

52.0

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 52.0
FF:10024-101D6 15,40,85 years, mixed 52.0

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The Human Protein Atlas project is funded
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