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TSEN15

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:14.1TPM
GTEx:10.6RPKM
FANTOM5:12.2Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA029237

  

Endothelial cells

 Not detected  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Medium  
 
 

COLON - HPA RNA-seq

Average TPM

14.1
overview Male, age 54
Sample 1
TPM: 13.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
TPM: 10.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
TPM: 10.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
TPM: 12.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
TPM: 11.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
TPM: 25.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
TPM: 12.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78
Sample 8
TPM: 11.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84
Sample 9
TPM: 16.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80
Sample 10
TPM: 17.0
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78
Sample 11
TPM: 17.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69
Sample 12
TPM: 15.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72
Sample 13
TPM: 9.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

10.6

GTEx sample id

RPKM
 

Colon - Sigmoid
Colon - Sigmoid
RPKM: 13.5
Samples: 149

Max RPKM: 25.7
Min RPKM: 7.9
Std RPKM: 2.7
Median RPKM: 13.4
GTEX-12WSG-2426-SM-5EQLZ 25.7
GTEX-ZYT6-2826-SM-5GICX 22.6
GTEX-ZTTD-2626-SM-57WEX 20.5
GTEX-11ZU8-1126-SM-5EQ5K 19.1
GTEX-X4EO-2726-SM-4E3HS 19.0
GTEX-14C5O-2626-SM-5RQI5 18.7
GTEX-11P7K-1826-SM-5HL5A 18.3
GTEX-WQUQ-2626-SM-4MVNP 18.2
Show all
 

Colon - Transverse
Colon - Transverse
RPKM: 8.4
Samples: 196

Max RPKM: 19.6
Min RPKM: 2.3
Std RPKM: 3.5
Median RPKM: 7.8
GTEX-145LS-2726-SM-5Q5D8 19.6
GTEX-14AS3-1126-SM-5Q5CR 19.0
GTEX-13U4I-2426-SM-5LU34 17.2
GTEX-13OW6-2126-SM-5N9GL 16.2
GTEX-P78B-1726-SM-3P5ZV 16.2
GTEX-13FHP-2426-SM-5KLZ5 16.1
GTEX-11ZVC-2126-SM-5EGJ1 15.9
GTEX-XYKS-2226-SM-4E3IU 15.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

12.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 12.2
FF:10014-101C5 62,83,84 years, mixed 12.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.