Expression of SAMD5 in cancer - Summary

CANCER ATLAS

Gene description

Sterile alpha motif domain containing 5

Protein class

Predicted intracellular proteins, Predicted membrane proteins

Protein evidence

Evidence at protein level

Colorectal cancer

Breast cancer

Prostate cancer

Lung cancer

Liver cancer

STAINING SUMMARY

HPA067811

Staining summary	Majority cases of of endometrial, breast and prostate cancers along with few cases of liver and urothelial cancer displayed weak to moderate cytoplasmic immunoreactivity. Remaining cancer tissues were negative.

GENE INFORMATION
Gene name	SAMD5 (HGNC Symbol)
Synonyms	dJ875H10.1
Description	Sterile alpha motif domain containing 5 (HGNC Symbol)
Entrez gene summary
Chromosome	6
Cytoband	q24.3
Chromosome location (bp)	147508927 - 147737547
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000203727 (version 83.38)
Entrez gene	389432
UniProt	Q5TGI4 (UniProt - Inferred from homology)
neXtProt	NX_Q5TGI4
Antibodypedia	SAMD5 antibodies

PROTEIN BROWSER

SAMD5-001	SAMD5-002

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
SAMD5-001 ENSP00000356444 ENST00000367474	Q5TGI4 [Direct mapping] Sterile alpha motif domain-containing protein 5 Show all	Predicted intracellular proteins Show all	GO:0005515 [protein binding] Show all	173 aa 19.2 kDa	No	0
SAMD5-002 ENSP00000456528 ENST00000566741	H3BS43 [Direct mapping] Sterile alpha motif domain-containing protein 5 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Show all	GO:0016021 [integral component of membrane] Show all	97 aa 11.1 kDa	No	1