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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:1.7TPM
GTEx:10.4RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:Low
Neuronal cells:Medium
Neuropil:Not detected
 

Antibody staining

Antibody HPA008736

 

Antibody CAB002224

 

Antibody CAB025546

 

Endothelial cells

Low   Low   Low  

Glial cells

Low   Not detected   Low  

Neuronal cells

High   Low   Medium  

Neuropil

Low   Not detected   Not detected  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

1.7

N/A Male, age 5
Sample 1
TPM: 0.0
overview Female, age 40
Sample 2
TPM: 0.0
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 5.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

10.4

GTEx sample id

RPKM

9.710.711.77.714.40246810121416
 
9.710.711.77.714.40246810121416

Brain - Cortex

Brain - Cortex
RPKM: 10.9
Samples: 114

Max RPKM: 16.5
Min RPKM: 7.7
Std RPKM: 1.6
Median RPKM: 10.7
GTEX-NPJ8-1526-SM-2D7VU 16.5
GTEX-ZZPT-3026-SM-5GZXH 16.4
GTEX-ZAJG-3126-SM-5HL9J 14.9
GTEX-1192X-3126-SM-5N9BY 14.4
GTEX-13FXS-3126-SM-5J2NN 14.0
GTEX-X4XX-3026-SM-3NMB2 13.9
GTEX-12ZZY-3026-SM-5GCOU 13.8
GTEX-X585-3026-SM-46MWF 13.8
GTEX-11OF3-2926-SM-5HL78 13.7
GTEX-13NYS-3126-SM-5KLYV 13.7
GTEX-QVJO-1426-SM-2S1QY 13.5
GTEX-11OC5-0726-SM-5P9JK 12.9
GTEX-12WSH-3026-SM-5CVNI 12.8
GTEX-WWYW-3126-SM-3NB39 12.8
GTEX-12ZZX-2926-SM-5GCOQ 12.5
GTEX-13SLX-3126-SM-5S2Q5 12.5
GTEX-RNOR-2326-SM-2TF4I 12.5
GTEX-Q2AG-2926-SM-2HMJ3 12.4
GTEX-13NYC-2826-SM-5K7WR 12.2
GTEX-13VXU-2926-SM-5LU5C 12.2
GTEX-UTHO-3026-SM-3GAFB 12.2
GTEX-13FLW-1426-SM-5K7YE 12.1
GTEX-117XS-3026-SM-5N9CA 12.0
GTEX-1313W-3126-SM-5LZUI 12.0
GTEX-11ONC-2926-SM-5P9JM 11.9
GTEX-145MG-3026-SM-5RQJA 11.9
GTEX-YFC4-3126-SM-5PNV6 11.9
GTEX-13G51-3026-SM-5IJB8 11.7
GTEX-14ASI-3026-SM-5S2PN 11.7
GTEX-14BMV-3026-SM-5S2PQ 11.7
GTEX-Z93S-2926-SM-57WB9 11.7
GTEX-12WSA-2926-SM-5EQ4D 11.6
GTEX-T6MN-2626-SM-32PMQ 11.5
GTEX-111FC-3126-SM-5GZZ2 11.4
GTEX-1128S-2726-SM-5H12C 11.4
GTEX-13IVO-2926-SM-5L3CZ 11.4
GTEX-144GL-3026-SM-5Q5CW 11.4
GTEX-11DXY-3226-SM-5GIDE 11.3
GTEX-145LS-3126-SM-5Q5BY 11.3
GTEX-R55F-1326-SM-5S2V4 11.3
GTEX-WVLH-3026-SM-3MJG9 11.3
GTEX-13NYB-3026-SM-5IJD7 11.2
GTEX-145MH-3026-SM-5Q5DZ 11.2
GTEX-QVUS-2826-SM-3GADB 11.2
GTEX-WZTO-2926-SM-3NM9I 11.2
GTEX-ZVT3-3026-SM-5E43N 11.2
GTEX-12WSC-3026-SM-5GCNF 11.0
GTEX-ZYFD-3026-SM-5E44C 11.0
GTEX-13FHO-3026-SM-5J1O9 10.9
GTEX-144FL-3026-SM-5O99C 10.9
GTEX-T5JC-2426-SM-3NMDB 10.9
GTEX-YJ89-3026-SM-5IFJI 10.9
GTEX-12126-1026-SM-5P9JJ 10.8
GTEX-13O3Q-2926-SM-5KM45 10.8
GTEX-13OVH-3026-SM-5MR4N 10.8
GTEX-145MF-2726-SM-5O995 10.8
GTEX-11GS4-3126-SM-5A5LH 10.7
GTEX-13OW6-3026-SM-5J2MI 10.7
GTEX-RU72-3026-SM-5SI7Y 10.7
GTEX-12ZZW-2926-SM-5LZUP 10.6
GTEX-WL46-2926-SM-3LK82 10.6
GTEX-11GSO-2926-SM-5HL73 10.5
GTEX-139T8-1026-SM-5J2MC 10.5
GTEX-NPJ7-2726-SM-2I3FT 10.5
GTEX-131YS-3126-SM-5KLYT 10.4
GTEX-13JUV-2926-SM-5LZX7 10.4
GTEX-TSE9-3026-SM-3DB76 10.4
GTEX-1399T-3026-SM-5KLZC 10.2
GTEX-ZUA1-3026-SM-59HJC 10.2
GTEX-PVOW-2526-SM-2XCF7 10.1
GTEX-XLM4-3026-SM-4AT6L 10.1
GTEX-XOTO-3026-SM-4B65M 10.1
GTEX-13S7M-3126-SM-5RQJQ 10.0
GTEX-Y111-2726-SM-4TT3N 10.0
GTEX-11O72-2926-SM-5BC4V 9.9
GTEX-13FHP-3026-SM-5IJBS 9.9
GTEX-13PL6-3126-SM-5LUAR 9.9
GTEX-14A5I-2926-SM-5Q5CQ 9.9
GTEX-T2IS-3026-SM-32QPM 9.9
GTEX-WHSE-3026-SM-3P5ZH 9.9
GTEX-12WSD-3126-SM-5HL7P 9.8
GTEX-12ZZZ-3026-SM-5BC67 9.8
GTEX-N7MT-1126-SM-5SI7V 9.8
GTEX-QDT8-2926-SM-32PKC 9.8
GTEX-11WQK-3026-SM-5EQL6 9.7
GTEX-13JVG-3126-SM-5L3FH 9.7
GTEX-13OW8-2826-SM-5L3GC 9.7
GTEX-1117F-3226-SM-5N9CT 9.6
GTEX-11PRG-2926-SM-5987A 9.5
GTEX-132Q8-3026-SM-5PNVG 9.5
GTEX-13QIC-2926-SM-5J2NF 9.5
GTEX-11DXW-1126-SM-5H12Q 9.4
GTEX-11ZUS-2926-SM-5FQSL 9.4
GTEX-13PVQ-3026-SM-5SI93 9.4
GTEX-ZAK1-3026-SM-5S2MJ 9.4
GTEX-OXRN-2426-SM-2I5EQ 9.3
GTEX-11GSP-3226-SM-5986O 9.2
GTEX-131XW-3126-SM-5LZUC 9.2
GTEX-PWO3-0926-SM-2I5EY 9.2
GTEX-11EI6-3026-SM-5GZZO 9.1
GTEX-11EMC-3226-SM-5EGKW 9.1
GTEX-11NUK-2926-SM-5A5MD 9.1
GTEX-QMR6-1426-SM-32PLA 9.0
GTEX-Y8DK-0826-SM-4TT3T 9.0
GTEX-1445S-3026-SM-5O9BR 8.9
GTEX-147GR-3026-SM-5S2ML 8.9
GTEX-ZE7O-3126-SM-5HL5X 8.8
GTEX-13O3O-3126-SM-5KM3H 8.6
GTEX-13OVJ-2826-SM-5L3GW 8.5
GTEX-11TTK-2926-SM-5PNYP 8.4
GTEX-13X6J-3026-SM-5Q5CU 8.4
GTEX-13OW7-3026-SM-5L3GY 8.3
GTEX-13X6K-2926-SM-5Q5D5 8.2
GTEX-11NV4-2126-SM-5N9DS 7.7
Show all
8.910.010.95.913.80246810121416
 
8.910.010.95.913.80246810121416

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 10.0
Samples: 108

Max RPKM: 17.9
Min RPKM: 5.9
Std RPKM: 1.8
Median RPKM: 10
GTEX-13N2G-0011-R10a-SM-5MR34 17.9
GTEX-13NYS-0011-R10a-SM-5MR4S 15.4
GTEX-NPJ8-0011-R10A-SM-2YUMO 14.9
GTEX-12WSA-0011-R10b-SM-5P9ET 14.0
GTEX-NL3H-0011-R10A-SM-2I3E9 13.8
GTEX-X4XX-0011-R10B-SM-46MWO 13.1
GTEX-NL4W-0011-R10A-SM-2I3DY 12.5
GTEX-ZE7O-0011-R10a-SM-57WAZ 12.5
GTEX-X4EP-0011-R10B-SM-4QASJ 12.4
GTEX-14ASI-0011-R10b-SM-5S2VZ 12.2
GTEX-XMD1-0011-R10A-SM-4AT4A 12.2
GTEX-13SLX-0011-R10a-SM-5P9HV 12.0
GTEX-12WSH-0011-R10a-SM-5LZUS 11.8
GTEX-13N1W-0011-R10b-SM-5MR4H 11.7
GTEX-X585-0011-R10A-SM-46MUY 11.7
GTEX-13QJC-0011-R10a-SM-5SI63 11.6
GTEX-13OW7-0011-R10a-SM-5L3H3 11.4
GTEX-12ZZY-0011-R10b-SM-5HL7W 11.3
GTEX-13CZV-0011-R10b-SM-5LZYD 11.2
GTEX-13FXS-0011-R10a-SM-5J2MA 11.2
GTEX-12WSF-0011-R10a-SM-5LZVH 11.1
GTEX-145MG-0011-R10a-SM-5PNWG 11.1
GTEX-145MH-0011-R10b-SM-5PNUK 11.1
GTEX-13FLW-0011-R10b-SM-5LZZF 11.0
GTEX-WWYW-0011-R10A-SM-3NB35 11.0
GTEX-YFC4-0011-R10a-SM-4SOK5 11.0
GTEX-13OW6-0011-R10a-SM-5L3HE 10.9
GTEX-ZF28-0011-R10a-SM-4WWEH 10.9
GTEX-12ZZZ-0011-R10a-SM-5P9HC 10.8
GTEX-13RTJ-0011-R10b-SM-5O9CW 10.8
GTEX-13JUV-0011-R10b-SM-5LZXR 10.7
GTEX-13S7M-0011-R10b-SM-5PNZB 10.7
GTEX-13X6K-0011-R10a-SM-5P9JR 10.7
GTEX-QVJO-0011-R10A-SM-2S1QJ 10.7
GTEX-12ZZX-0011-R10b-SM-5DUWK 10.6
GTEX-145LS-0011-R10a-SM-5PNUQ 10.4
GTEX-147GR-0011-R10b-SM-5S2UM 10.4
GTEX-NPJ7-0011-R10A-SM-2I3E5 10.4
GTEX-13QIC-0011-R10a-SM-5O9C7 10.3
GTEX-14BIL-0011-R10a-SM-5SI75 10.3
GTEX-RVPU-0011-R10A-SM-2XCAH 10.3
GTEX-131YS-0011-R10b-SM-5EQ5N 10.2
GTEX-T6MN-0011-R10A-SM-32QP7 10.2
GTEX-WVLH-0011-R10A-SM-3MJFM 10.2
GTEX-WZTO-0011-R10B-SM-4E3KB 10.2
GTEX-X261-0011-R10B-SM-4E3JT 10.2
GTEX-ZDXO-0011-R10a-SM-4WWD8 10.2
GTEX-11WQC-0011-R10a-SM-57WCT 10.1
GTEX-1313W-0011-R10b-SM-5DUXA 10.1
GTEX-N7MT-0011-R10A-SM-2I3E1 10.1
GTEX-ZVZQ-0011-R10b-SM-51MRT 10.1
GTEX-132Q8-0011-R10b-SM-5DUWZ 10.0
GTEX-13O3Q-0011-R10b-SM-5KM39 10.0
GTEX-13SLW-0011-R10a-SM-5S2UI 10.0
GTEX-13X6I-0011-R10a-SM-5PNWI 10.0
GTEX-14BIN-0011-R10a-SM-5S2UA 10.0
GTEX-N7MS-0011-R10A-SM-2HMJK 10.0
GTEX-12WSC-0011-R10a-SM-5GU57 9.9
GTEX-12WSD-0011-R10b-SM-5GU79 9.9
GTEX-T5JC-0011-R10A-SM-32PM2 9.9
GTEX-Q2AG-0011-R10A-SM-2HMLA 9.8
GTEX-S7SE-0011-R10A-SM-2XCDF 9.8
GTEX-YJ89-0011-R10a-SM-4SOK9 9.8
GTEX-Y8DK-0011-R10A-SM-4SOK1 9.6
GTEX-11H98-0011-R10b-SM-5NQ98 9.5
GTEX-13O3O-0011-R10a-SM-5LUA9 9.5
GTEX-Z93S-0011-R10a-SM-4RGNM 9.5
GTEX-13FHO-0011-R10b-SM-5J2MM 9.4
GTEX-13FLV-0011-R10b-SM-5LZZ2 9.4
GTEX-13JVG-0011-R10b-SM-5KM2P 9.4
GTEX-TSE9-0011-R10A-SM-3DB7O 9.3
GTEX-WL46-0011-R10A-SM-3MJFQ 9.3
GTEX-XLM4-0011-R10A-SM-4AT5P 9.3
GTEX-QVUS-0011-R10A-SM-3GIK3 9.2
GTEX-13IVO-0011-R10a-SM-5LZY3 9.1
GTEX-13X6J-0011-R10b-SM-5PNWA 9.1
GTEX-1477Z-0011-R10b-SM-5S2RF 9.1
GTEX-OXRN-0011-R10A-SM-2I5GC 9.1
GTEX-131XH-0011-R10a-SM-5EGLJ 9.0
GTEX-13OVL-0011-R10a-SM-5L3GS 9.0
GTEX-13NYB-0011-R10a-SM-5KM43 8.9
GTEX-ZVT3-0011-R10b-SM-57WB6 8.9
GTEX-11GSP-0011-R10a-SM-5NQ7J 8.8
GTEX-12WSE-0011-R10b-SM-5P9JV 8.8
GTEX-12WSM-0011-R10a-SM-5DUWV 8.7
GTEX-145LU-0011-R10a-SM-5PNWJ 8.7
GTEX-QDT8-0011-R10A-SM-32PKG 8.5
GTEX-P44H-0011-R10A-SM-2XCEK 8.4
GTEX-ZAB4-0011-R10a-SM-4SOKH 8.3
GTEX-12ZZW-0011-R10b-SM-5HL9X 8.2
GTEX-12126-0011-R10b-SM-5BC6T 8.1
GTEX-QMR6-0011-R10A-SM-32PKO 8.1
GTEX-1445S-0011-R10a-SM-5PNWB 8.0
GTEX-13FTZ-0011-R10b-SM-5KLZS 7.9
GTEX-13G51-0011-R10b-SM-5LZYF 7.9
GTEX-13NZA-0011-R10b-SM-5KM54 7.9
GTEX-OXRO-0011-R10A-SM-2I5EH 7.9
GTEX-ZUA1-0011-R10a-SM-51MT6 7.9
GTEX-139TS-0011-R10a-SM-5K7TU 7.8
GTEX-147F4-0011-R10b-SM-5S2WC 7.8
GTEX-11ZUS-0011-R10b-SM-5BC79 7.6
GTEX-11WQK-0011-R10a-SM-5BC6R 7.5
GTEX-13OVJ-0011-R10b-SM-5L3HT 7.4
GTEX-13OW8-0011-R10a-SM-5L3H6 7.4
GTEX-ZV68-0011-R10a-SM-51MT7 7.3
GTEX-ZXG5-0011-R10a-SM-57WDD 7.1
GTEX-131XW-0011-R10a-SM-5DUVA 6.4
GTEX-14753-0011-R10b-SM-5S2WE 5.9
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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