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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:18.2TPM
GTEx:81.4RPKM
FANTOM5:145.4Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA046995

 

Antibody HPA050327

 

Glandular cells

High   Medium  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

18.2

overview Male, age 65
Sample 1
TPM: 19.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 18.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 11.9
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 23.9

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

81.4

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 81.4
Samples: 88

Max RPKM: 152.2
Min RPKM: 18.5
Std RPKM: 25.9
Median RPKM: 81.8
GTEX-13FTW-2026-SM-5IJE2 152.2
GTEX-Y5LM-1626-SM-4VDTB 147.5
GTEX-14E6E-1626-SM-5RQI7 129.0
GTEX-UPK5-2026-SM-4JBIM 124.0
GTEX-Z9EW-0926-SM-5CVMM 123.0
GTEX-WRHK-1026-SM-4MVOD 120.1
GTEX-13CF3-1226-SM-5LZXN 113.7
GTEX-ZA64-1226-SM-5HL7B 113.6
GTEX-WFJO-0926-SM-4LVM2 111.1
GTEX-ZVP2-1726-SM-5GU5P 111.0
GTEX-XGQ4-1326-SM-4GIDU 109.9
GTEX-WFG8-1626-SM-4LVMB 108.1
GTEX-ZYFG-2026-SM-5E43Y 108.0
GTEX-11NSD-1726-SM-5N9C3 106.6
GTEX-XAJ8-0526-SM-47JYK 106.2
GTEX-VUSG-1726-SM-4KKZL 103.9
GTEX-ZTX8-0526-SM-59HLD 102.8
GTEX-139YR-2226-SM-5IFFW 102.7
GTEX-133LE-1426-SM-5IFH1 101.6
GTEX-11EQ9-1326-SM-5985X 100.4
GTEX-ZYWO-1526-SM-5SIAL 100.4
GTEX-X15G-1426-SM-4PQZK 99.8
GTEX-13RTK-0826-SM-5Q5C6 99.6
GTEX-1122O-1326-SM-5H11F 98.3
GTEX-ZVT2-2126-SM-5NQ93 98.3
GTEX-ZTPG-2626-SM-57WFX 97.3
GTEX-13O61-1326-SM-5KM31 95.5
GTEX-XUZC-1426-SM-4BRV3 92.6
GTEX-11VI4-1626-SM-5EQKO 92.0
GTEX-YB5E-1526-SM-5IFIE 91.5
GTEX-13FH7-1226-SM-5IJFK 91.3
GTEX-VJYA-0926-SM-4KL1N 90.2
GTEX-ZEX8-1826-SM-57WBH 89.7
GTEX-145LT-1026-SM-5LU9O 89.4
GTEX-ZLV1-1126-SM-4WWBW 88.1
GTEX-11P82-0826-SM-5P9GU 88.0
GTEX-11XUK-1426-SM-5EQMG 87.2
GTEX-WH7G-1626-SM-4LVMY 86.6
GTEX-1399U-2126-SM-5IFEZ 85.8
GTEX-ZLFU-1526-SM-4WWBT 85.2
GTEX-ZP4G-1626-SM-57WGD 84.9
GTEX-13PL7-2626-SM-5IFH4 84.1
GTEX-XXEK-1026-SM-4BRUW 83.9
GTEX-139T6-1026-SM-5IJGC 82.1
GTEX-ZVZP-1826-SM-5GZXB 81.5
GTEX-13QBU-1926-SM-5IJEW 81.5
GTEX-1399R-2026-SM-5K7WN 81.0
GTEX-ZC5H-2326-SM-4WAYT 80.6
GTEX-ZPIC-2326-SM-57WDW 79.6
GTEX-12BJ1-1926-SM-5HL9Z 79.2
GTEX-X5EB-1626-SM-4E3IV 78.9
GTEX-14DAR-1426-SM-5RQIR 75.9
GTEX-11DXX-1626-SM-5H11H 75.2
GTEX-1399S-2026-SM-5KM4B 74.9
GTEX-ZZ64-0526-SM-5GZXM 74.9
GTEX-145ME-0926-SM-5O9AR 74.5
GTEX-WQUQ-2426-SM-4MVNW 73.8
GTEX-13D11-0726-SM-5LZZB 73.8
GTEX-11P7K-1626-SM-5GU63 72.3
GTEX-ZQG8-2526-SM-57WEQ 71.0
GTEX-XBED-1426-SM-4AT4G 68.4
GTEX-ZXES-1526-SM-5NQ95 68.1
GTEX-131XG-1726-SM-5LZUR 67.9
GTEX-13111-1426-SM-5DUW3 67.5
GTEX-13113-1226-SM-5EGHT 66.3
GTEX-YEC4-1726-SM-4W21E 66.0
GTEX-WFG7-1726-SM-4LVME 64.5
GTEX-11DXZ-1326-SM-5H11X 63.4
GTEX-Y9LG-1626-SM-5IFHM 62.9
GTEX-11I78-1126-SM-5A5K5 62.6
GTEX-148VJ-2226-SM-5NQ9M 62.4
GTEX-131XF-1326-SM-5GCMQ 59.9
GTEX-1192X-2526-SM-59868 55.8
GTEX-YF7O-1826-SM-5IFIU 55.2
GTEX-Y3IK-1726-SM-4YCCR 55.2
GTEX-Y114-1426-SM-4TT6W 52.9
GTEX-ZPCL-1726-SM-57WEO 52.2
GTEX-13O21-1026-SM-5IJDU 50.3
GTEX-XMK1-1826-SM-4B66F 45.8
GTEX-ZTSS-0926-SM-59865 45.6
GTEX-111YS-1426-SM-5GID8 44.9
GTEX-12WSK-1526-SM-5CVNO 42.7
GTEX-WEY5-1526-SM-4LMJF 37.7
GTEX-13OVI-1926-SM-5IJCG 32.9
GTEX-111CU-1326-SM-5NQ8L 30.2
GTEX-117YX-0326-SM-5GICL 29.7
GTEX-ZF2S-1726-SM-57WFT 28.8
GTEX-ZQUD-0926-SM-57WE3 18.5
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

145.4

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 145.4
FF:10024-101D6 15,40,85 years, mixed 145.4

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.