Tissue expression of SMIM5 - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	0.5	TPM
GTEx:	1.4	RPKM
FANTOM5:	0.0	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	High
Chondrocytes:	High
Fibroblasts:	Medium

Antibody staining	Antibody HPA071268
Adipocytes	High
Chondrocytes	High
Fibroblasts	Medium

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	High
Fibroblasts:	Medium
Peripheral nerve:	High

Antibody staining	Antibody HPA071268
Adipocytes	High
Fibroblasts	Medium
Peripheral nerve	High

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	0.5

Female, age 80

Sample 1
TPM: 0.1

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 0.2

Female, age 57

Sample 3
TPM: 0.3

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 1.5

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 0.4

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	1.4

GTEx sample id

RPKM

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 1.4

Samples: 350

Max RPKM: 25.4
Min RPKM: 0.1
Std RPKM: 1.6
Median RPKM: 1.1

GTEX-1269C-2726-SM-5EGJ4

25.4

GTEX-XOTO-0226-SM-4B66H

9.1

GTEX-147GR-0426-SM-5S2OL

8.4

GTEX-145MF-0526-SM-5LUA6

7.1

GTEX-11ONC-2526-SM-5986W

6.4

GTEX-X638-0226-SM-47JZ9

6.2

GTEX-13QJ3-0426-SM-5RQHP

5.3

GTEX-12WSA-0326-SM-5BC6I

5.1

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Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 1.4

Samples: 227

Max RPKM: 5.3
Min RPKM: 0.1
Std RPKM: 0.9
Median RPKM: 1.1

GTEX-WOFM-0726-SM-3MJF8

5.3

GTEX-14A6H-1026-SM-5SIAZ

5.1

GTEX-WWTW-1326-SM-4MVNT

4.9

GTEX-11NUK-2026-SM-5PNVZ

4.4

GTEX-YFCO-1126-SM-5S2N9

4.2

GTEX-13G51-0526-SM-5IJCQ

4.1

GTEX-1212Z-0526-SM-5FQSQ

3.9

GTEX-Y9LG-1226-SM-4VBQA

3.5

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ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	0.0

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 0.0

FF:10010-101C1

65,65,76 years, mixed

0.0