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Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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CSHL1
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    TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation


Dictionary


Tissue proteome

GENERAL INFORMATION

Gene name

CSHL1

Gene description

Chorionic somatomammotropin hormone-like 1

Protein class

Predicted intracellular proteins
Predicted secreted proteins

Predicted localization

Intracellular,Secreted

Number of transcripts

8
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:Tissue enriched (placenta)
GTEx:Tissue enriched (pituitary gland)
FANTOM5:Group enriched (pituitary gland, placenta)

Protein evidence

Evidence at protein level

Protein expression

Selective cytoplasmic expression in trophoblastic cells.

DATA RELIABILITY

Data reliability
description

Antibody staining consistent with RNA expression data.

Reliability score

Supported based on 2 antibodies.
HPA043715 , CAB025646
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM) Protein expression (score)
Brain
Pituitary gland
N/A
Cerebral cortex
Hippocampus
N/A
Caudate
N/A
Cerebellum
N/A
Endocrine tissues
Thyroid gland
Parathyroid gland
Adrenal gland
Bone marrow & immune system
Appendix
Bone marrow
Lymph node
Tonsil
Spleen
Muscle tissues
Heart muscle
Skeletal muscle
Smooth muscle
Lung
Nasopharynx
N/A
Bronchus
N/A
Lung
Liver & gallbladder
Liver
Gallbladder
Pancreas
Pancreas
Gastrointestinal tract
Oral mucosa
N/A
Salivary gland
Esophagus
Stomach
Duodenum
Small intestine
Colon
Rectum
Kidney & urinary bladder
Kidney
Urinary bladder
Male tissues
Testis
Epididymis
Prostate
Seminal vesicle
Female tissues
Breast
Vagina
N/A
Cervix, uterine
Endometrium
Fallopian tube
Ovary
Placenta
Adipose & soft tissue
Adipose tissue
Soft tissue
N/A
Skin
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis

Placenta

PROTEIN EXPRESSION OVERVIEW

Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW

HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enriched (placenta)
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enriched (pituitary gland)
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Group enriched (pituitary gland, placenta)

GENE INFORMATION

Gene name

CSHL1 (HGNC Symbol)

Synonyms

CS-5, CSHP1, CSL, hCS-L, MGC149868

Description

Chorionic somatomammotropin hormone-like 1 (HGNC Symbol)

Entrez gene summary

The protein encoded by this gene is a member of the somatotropin/prolactin family of hormones which play an important role in growth control. The gene, along with four other related genes, is located at the growth hormone locus on chromosome 17 where they are interspersed in the same transcriptional orientation; an arrangement which is thought to have evolved by a series of gene duplications. Although the five genes share a remarkably high degree of sequence identity, they are expressed selectively in different tissues. This particular family member is expressed in placental villi, although it was originally thought to be a pseudogene. In fact, alternative splicing suggests that the majority of the transcripts would be unable to express a secreted protein. Alternatively spliced transcript variants encoding different isoforms have been identified. [provided by RefSeq, Jul 2008]

Chromosome

17

Cytoband

q23.3

Chromosome location (bp)

63909597 - 63918838

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000204414 (version 83.38)

Entrez gene

1444

UniProt

Q14406 (UniProt - Evidence at transcript level)

neXtProt

NX_Q14406

Antibodypedia

CSHL1 antibodies

PROTEIN BROWSER

CSHL1-001
CSHL1-002
CSHL1-003
CSHL1-006
CSHL1-008
CSHL1-009
CSHL1-201
CSHL1-202

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

CSHL1-001
ENSP00000316360
ENST00000346606
Q14406 [Direct mapping]
Chorionic somatomammotropin hormone-like 1
I6L999 [Target identity:100%; Query identity:100%]
Chorionic somatomammotropin hormone-like 1; HCG1749481, isoform CRA_ab
Show all
Predicted intracellular proteins
Show all
GO:0005179 [hormone activity]
GO:0005575 [cellular_component]
GO:0005576 [extracellular region]
GO:0008150 [biological_process]
GO:0046872 [metal ion binding]
Show all
128 aa
14.9 kDa
No 0
CSHL1-002
ENSP00000259003
ENST00000259003
A0A0B4J1R0 [Direct mapping]
Chorionic somatomammotropin hormone-like 1
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
Show all
GO:0005179 [hormone activity]
GO:0005576 [extracellular region]
Show all
160 aa
18.2 kDa
Yes 0
CSHL1-003
ENSP00000452900
ENST00000561003
H0YKQ4 [Direct mapping]
Chorionic somatomammotropin hormone-like 1
Show all
Predicted intracellular proteins
Show all
GO:0005179 [hormone activity]
GO:0005576 [extracellular region]
Show all
178 aa
19.6 kDa
No 0
CSHL1-006
ENSP00000413501
ENST00000450719
H7C3R7 [Direct mapping]
Chorionic somatomammotropin hormone-like 1
Show all
   SPOCTOPUS predicted secreted proteins
Predicted intracellular proteins
Show all
GO:0005179 [hormone activity]
GO:0005576 [extracellular region]
Show all
167 aa
18.6 kDa
No 0
CSHL1-008
ENSP00000402632
ENST00000438387
Q14406 [Direct mapping]
Chorionic somatomammotropin hormone-like 1
Show all
Predicted intracellular proteins
Show all
GO:0005179 [hormone activity]
GO:0005575 [cellular_component]
GO:0005576 [extracellular region]
GO:0008150 [biological_process]
GO:0046872 [metal ion binding]
Show all
139 aa
15.9 kDa
No 0
CSHL1-009
ENSP00000309524
ENST00000309894
Q14406 [Direct mapping]
Chorionic somatomammotropin hormone-like 1
Show all
   MEMSAT3 predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Show all
GO:0005179 [hormone activity]
GO:0005575 [cellular_component]
GO:0005576 [extracellular region]
GO:0008150 [biological_process]
GO:0046872 [metal ion binding]
Show all
222 aa
25.4 kDa
Yes 0
CSHL1-201
ENSP00000376569
ENST00000392824
J3QT06 [Direct mapping]
Chorionic somatomammotropin hormone-like 1
Show all
   THUMBUP predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Show all
GO:0005179 [hormone activity]
GO:0005576 [extracellular region]
Show all
217 aa
24.9 kDa
Yes 0
CSHL1-202
ENSP00000483369
ENST00000611417
A0A087X0G4 [Direct mapping]
Chorionic somatomammotropin hormone-like 1
Show all
   MEMSAT3 predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Show all
GO:0005179 [hormone activity]
GO:0005576 [extracellular region]
Show all
217 aa
24.9 kDa
Yes 0

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