Cell atlas - LY6G6F - The Human Protein Atlas

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LY6G6F

TISSUE

CELL

CANCER

CELL ATLAS RNA EXPRESSION

GENE/PROTEIN

Dictionary

Human cell

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GENERAL INFORMATION
Gene name	LY6G6F
Gene description	Lymphocyte antigen 6 complex, locus G6F
Protein class	Predicted membrane proteins
Predicted localization	Membrane
Number of transcripts	1
	SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION
Summary
RNA cell category	Cell line enriched (HEL)
Protein evidence	Evidence at protein level
Main location	Not available

DATA RELIABILITY
Reliability score	Pending cell analysis.

ASSAYS

RNA EXPRESSION OVERVIEW
RNA cell line category: Cell line enriched (HEL) Organ Origin Category Expression Alphabetical Cell lines sorted after organ of phenotypic resemblance. Cell lines sorted after biological source for establishment. Cell lines sorted after the cell line category according to Cellosaurus. Cell lines sorted on descending RNA expression. Cell lines sorted alphabetically.

GENE INFORMATION
Gene name	LY6G6F (HGNC Symbol)
Synonyms	C6orf21, G6f, LY6G6D, NG32
Description	Lymphocyte antigen 6 complex, locus G6F (HGNC Symbol)
Entrez gene summary	The human G6f protein is a type I transmembrane protein belonging to the immunoglobin (Ig) superfamily, which is comprised of cell-surface proteins involved in the immune system and cellular recognition (de Vet et al., 2003 [PubMed 12852788]).[supplied by OMIM, Mar 2008]
Chromosome	6
Cytoband	p21.33
Chromosome location (bp)	31706885 - 31710595
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000204424 (version 83.38)
Entrez gene	259215
UniProt	Q5SQ64 (UniProt - Evidence at protein level)
neXtProt	NX_Q5SQ64
Antibodypedia	LY6G6F antibodies

PROTEIN BROWSER

LY6G6F-001

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
LY6G6F-001 ENSP00000364992 ENST00000375832	Q5SQ64 [Direct mapping] Lymphocyte antigen 6 complex locus protein G6f Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Kim et al 2014) Show all	GO:0005515 [protein binding] GO:0005886 [plasma membrane] GO:0016021 [integral component of membrane] Show all	297 aa 32.5 kDa	Yes	1

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.