Cell atlas - GPANK1 - The Human Protein Atlas

We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.

GPANK1

TISSUE

CELL

CANCER

CELL ATLAS RNA EXPRESSION HUMAN CELLS

GENE/PROTEIN

Antibody validation

Dictionary
	Endoplasmic reticulum

Human cell
	Endoplasmic Reticulum

Please wait until image is loaded before changing channels

GENERAL INFORMATION
Gene name	GPANK1
Gene description	G patch domain and ankyrin repeats 1
Protein class	Plasma proteins Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	8
	SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION
Summary	Localized to the endoplasmic reticulum.
RNA cell category	Mixed
Protein evidence	Evidence at protein level
Main location	Localized to the Endoplasmic reticulum (approved)

DATA RELIABILITY
Reliability score	Approved based on 1 antibody. HPA006301
	SHOW MORE

ASSAYS

RNA EXPRESSION OVERVIEW
RNA cell line category: Mixed Organ Origin Category Expression Alphabetical Cell lines sorted after organ of phenotypic resemblance. Cell lines sorted after biological source for establishment. Cell lines sorted after the cell line category according to Cellosaurus. Cell lines sorted on descending RNA expression. Cell lines sorted alphabetically.

HUMAN CELLS

Summary

Localized to the endoplasmic reticulum.

Main location

Endoplasmic reticulum (approved)


	Toggle channels	Low High G1 S G2 M N/A

Thumbnail	Antibody	Cell line	Location	Single-cell variation	Cell cycle dependent variation
	HPA006301	A-431	Endoplasmic reticulum
	HPA006301	U-2 OS	Endoplasmic reticulum
	HPA006301	U-251 MG	Endoplasmic reticulum

GENE INFORMATION
Gene name	GPANK1 (HGNC Symbol)
Synonyms	ANKRD59, BAT4, D6S54E, G5, GPATCH10
Description	G patch domain and ankyrin repeats 1 (HGNC Symbol)
Entrez gene summary	This gene is located in a cluster of HLA-B-associated transcripts, which is included in the human major histocompatability complex III region. This gene encodes a protein which is thought to play a role in immunity. Multiple alternatively spliced variants, encoding the same protein, have been identified. [provided by RefSeq, Nov 2010]
Chromosome	6
Cytoband	p21.33
Chromosome location (bp)	31661229 - 31666283
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000204438 (version 83.38)
Entrez gene	7918
UniProt	O95872 (UniProt - Evidence at protein level)
neXtProt	NX_O95872
Antibodypedia	GPANK1 antibodies

PROTEIN BROWSER

GPANK1-001	GPANK1-002	GPANK1-003	GPANK1-004	GPANK1-005	GPANK1-008	GPANK1-009	GPANK1-010

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
GPANK1-001 ENSP00000365065 ENST00000375900	O95872 [Direct mapping] G patch domain and ankyrin repeat-containing protein 1 A0A024RCU2 [Target identity:100%; Query identity:100%] HLA-B associated transcript 4, isoform CRA_a Show all	Predicted intracellular proteins Plasma proteins Protein evidence (Kim et al 2014) Show all	GO:0003676 [nucleic acid binding] GO:0005515 [protein binding] Show all	356 aa 39.3 kDa	No	0
GPANK1-002 ENSP00000365059 ENST00000375895	O95872 [Direct mapping] G patch domain and ankyrin repeat-containing protein 1 A0A024RCU2 [Target identity:100%; Query identity:100%] HLA-B associated transcript 4, isoform CRA_a Show all	Predicted intracellular proteins Plasma proteins Show all	GO:0003676 [nucleic acid binding] GO:0005515 [protein binding] Show all	356 aa 39.3 kDa	No	0
GPANK1-003 ENSP00000365071 ENST00000375906	O95872 [Direct mapping] G patch domain and ankyrin repeat-containing protein 1 A0A024RCU2 [Target identity:100%; Query identity:100%] HLA-B associated transcript 4, isoform CRA_a Show all	Predicted intracellular proteins Plasma proteins Protein evidence (Kim et al 2014) Show all	GO:0003676 [nucleic acid binding] GO:0005515 [protein binding] Show all	356 aa 39.3 kDa	No	0
GPANK1-004 ENSP00000365057 ENST00000375893	O95872 [Direct mapping] G patch domain and ankyrin repeat-containing protein 1 A0A024RCU2 [Target identity:100%; Query identity:100%] HLA-B associated transcript 4, isoform CRA_a Show all	Predicted intracellular proteins Plasma proteins Protein evidence (Kim et al 2014) Show all	GO:0003676 [nucleic acid binding] GO:0005515 [protein binding] Show all	356 aa 39.3 kDa	No	0
GPANK1-005 ENSP00000365060 ENST00000375896	O95872 [Direct mapping] G patch domain and ankyrin repeat-containing protein 1 A0A024RCU2 [Target identity:100%; Query identity:100%] HLA-B associated transcript 4, isoform CRA_a Show all	Predicted intracellular proteins Plasma proteins Protein evidence (Kim et al 2014) Show all	GO:0003676 [nucleic acid binding] GO:0005515 [protein binding] Show all	356 aa 39.3 kDa	No	0
GPANK1-008 ENSP00000395307 ENST00000458083	A0A0A0MSL4 [Direct mapping] G patch domain and ankyrin repeat-containing protein 1 Show all	Predicted intracellular proteins Show all		165 aa 18 kDa	No	0
GPANK1-009 ENSP00000409349 ENST00000445768	F6QYZ9 [Direct mapping] G patch domain and ankyrin repeat-containing protein 1 Show all	Predicted intracellular proteins Show all		152 aa 16.7 kDa	No	0
GPANK1-010 ENSP00000395484 ENST00000456540	A0A0A0MSL5 [Direct mapping] G patch domain and ankyrin repeat-containing protein 1 Show all	Predicted intracellular proteins Show all		90 aa 9.8 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.