Cell atlas - PSORS1C1 - The Human Protein Atlas

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PSORS1C1

TISSUE

CELL

CANCER

CELL ATLAS RNA EXPRESSION HUMAN CELLS

GENE/PROTEIN

Antibody validation

Dictionary
	Nucleus

Human cell
	Nucleoplasm

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GENERAL INFORMATION
Gene name	PSORS1C1
Gene description	Psoriasis susceptibility 1 candidate 1
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	3
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HUMAN PROTEIN ATLAS INFORMATION
Summary	Localized to the nucleus.
RNA cell category	Cell line enhanced (hTCEpi)
Protein evidence	Evidence at transcript level
Main location	Localized to the Nucleus (uncertain)

DATA RELIABILITY
Reliability score	Uncertain based on 1 antibody. HPA045049
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ASSAYS

RNA EXPRESSION OVERVIEW
RNA cell line category: Cell line enhanced (hTCEpi) Organ Origin Category Expression Alphabetical Cell lines sorted after organ of phenotypic resemblance. Cell lines sorted after biological source for establishment. Cell lines sorted after the cell line category according to Cellosaurus. Cell lines sorted on descending RNA expression. Cell lines sorted alphabetically.

HUMAN CELLS

Summary

Localized to the nucleus.

Main location

Nucleus (uncertain)


	Toggle channels	Low High G1 S G2 M N/A

Thumbnail	Antibody	Cell line	Location	Single-cell variation	Cell cycle dependent variation
	HPA045049	A-431	Nucleus
	HPA045049	U-2 OS	Nucleus
	HPA045049	U-251 MG	Nucleus

GENE INFORMATION
Gene name	PSORS1C1 (HGNC Symbol)
Synonyms	C6orf16, SEEK1
Description	Psoriasis susceptibility 1 candidate 1 (HGNC Symbol)
Entrez gene summary	This gene is one of several genes thought to confer susceptibility to psoriasis and systemic sclerosis, located on chromosome 6 near the major histocompatibility complex (MHC) class I region. [provided by RefSeq, Sep 2011]
Chromosome	6
Cytoband	p21.33
Chromosome location (bp)	31114750 - 31140092
Protein evidence	Evidence at transcript level (all genes)
Ensembl	ENSG00000204540 (version 83.38)
Entrez gene	170679
UniProt	Q9UIG5 (UniProt - Evidence at transcript level)
neXtProt	NX_Q9UIG5
Antibodypedia	PSORS1C1 antibodies

PROTEIN BROWSER

PSORS1C1-001	PSORS1C1-005	PSORS1C1-006

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
PSORS1C1-001 ENSP00000259881 ENST00000259881	Q9UIG5 [Direct mapping] Psoriasis susceptibility 1 candidate gene 1 protein D2IYL0 [Target identity:100%; Query identity:100%] Psoriasis susceptibility 1 candidate 1; SEEK1 Show all	Predicted intracellular proteins Show all		152 aa 16.6 kDa	No	0
PSORS1C1-005 ENSP00000447158 ENST00000481450	Q2M3K9 [Direct mapping] PSORS1C1 protein; Psoriasis susceptibility 1 candidate gene 1 protein Show all	Predicted intracellular proteins Show all		89 aa 9.6 kDa	No	0
PSORS1C1-006 ENSP00000449471 ENST00000547221	A0A0C4DGJ2 [Direct mapping] Psoriasis susceptibility 1 candidate gene 1 protein Show all	Predicted intracellular proteins Show all		104 aa 11.3 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.