Tissue expression of VIT - Summary - The Human Protein Atlas

GENERAL INFORMATION
Gene name	VIT
Gene description	Vitrin
Protein class	Predicted intracellular proteins Predicted secreted proteins
Predicted localization	Intracellular,Secreted
Number of transcripts	8
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Tissue enhanced (ovary)
GTEx:	Mixed
FANTOM5:	Mixed

Protein evidence

Evidence at protein level

DATA RELIABILITY
Reliability score	Pending normal tissue annotation.

RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

N/A

Cerebral cortex

N/A

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

N/A

Thyroid gland

N/A

Parathyroid gland

N/A

Adrenal gland

N/A

Bone marrow & immune system

N/A

Appendix

N/A

Bone marrow

N/A

Lymph node

N/A

Tonsil

N/A

Spleen

N/A

Muscle tissues

N/A

Heart muscle

N/A

Skeletal muscle

N/A

Smooth muscle

N/A

Lung

N/A

Nasopharynx

N/A

Bronchus

N/A

Lung

N/A

Liver & gallbladder

N/A

Liver

N/A

Gallbladder

N/A

Pancreas

N/A

Pancreas

N/A

Gastrointestinal tract

N/A

Oral mucosa

N/A

Salivary gland

N/A

Esophagus

N/A

Stomach

N/A

Duodenum

N/A

Small intestine

N/A

Colon

N/A

Rectum

N/A

Kidney & urinary bladder

N/A

Kidney

N/A

Urinary bladder

N/A

Male tissues

N/A

Testis

N/A

Epididymis

N/A

Prostate

N/A

Seminal vesicle

N/A

Female tissues

N/A

Breast

N/A

Vagina

N/A

Cervix, uterine

N/A

Endometrium

N/A

Fallopian tube

N/A

Ovary

N/A

Placenta

N/A

Adipose & soft tissue

N/A

Adipose tissue

N/A

Soft tissue

N/A

Skin

N/A

Skin

N/A

PROTEIN EXPRESSION OVERVIEW
Pending normal tissue annotation.

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Tissue enhanced (ovary)
GTEx dataset Organ Expression Alphabetical RNA tissue category: Mixed
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Mixed

GENE INFORMATION
Gene name	VIT
Synonyms
Description	Vitrin (HGNC Symbol)
Entrez gene summary
Chromosome	2
Cytoband	p22.2
Chromosome location (bp)	36696690 - 36814792
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000205221 (version 83.38)
Entrez gene	5212
UniProt	Q6UXI7 (UniProt - Evidence at transcript level)
neXtProt	NX_Q6UXI7
Antibodypedia	VIT antibodies

PROTEIN BROWSER

VIT-001	VIT-002	VIT-003	VIT-004	VIT-006	VIT-007	VIT-008	VIT-201

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
VIT-001 ENSP00000417874 ENST00000497382	C9J6F5 [Direct mapping] Vitrin Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		347 aa 38.7 kDa	No	0
VIT-002 ENSP00000393561 ENST00000457137	Q6UXI7 [Direct mapping] Vitrin Show all	MEMSAT3 predicted membrane proteins Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all		203 aa 21.8 kDa	Yes	0
VIT-003 ENSP00000384154 ENST00000404084	B5MD45 [Direct mapping] Vitrin Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		630 aa 68.7 kDa	No	0
VIT-004 ENSP00000385658 ENST00000401530	Q6UXI7 [Direct mapping] Vitrin Show all	Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all		657 aa 71.8 kDa	Yes	0
VIT-006 ENSP00000368544 ENST00000379242	Q6UXI7 [Direct mapping] Vitrin Show all	Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005539 [glycosaminoglycan binding] GO:0005578 [proteinaceous extracellular matrix] GO:0005614 [interstitial matrix] GO:0010811 [positive regulation of cell-substrate adhesion] GO:0030198 [extracellular matrix organization] Show all	693 aa 75.6 kDa	Yes	0
VIT-007 ENSP00000368543 ENST00000379241	Q6UXI7 [Direct mapping] Vitrin Show all	MEMSAT3 predicted membrane proteins Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all		656 aa 71.7 kDa	Yes	0
VIT-008 ENSP00000419251 ENST00000464309	H7C587 [Direct mapping] Vitrin Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		134 aa 14.3 kDa	No	0
VIT-201 ENSP00000374625 ENST00000389975	Q6UXI7 [Direct mapping] Vitrin Show all	MEMSAT3 predicted membrane proteins Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all		678 aa 73.9 kDa	Yes	0