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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:406.1RPKM
FANTOM5:40.0Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Medium
 

Antibody staining

Antibody CAB033806

 

Glial cells

Low  

Neuronal cells

Medium  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

406.1

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 406.1
Samples: 117

Max RPKM: 794.4
Min RPKM: 190.4
Std RPKM: 120.1
Median RPKM: 395.2
GTEX-X585-0011-R5A-SM-46MVI 794.4
GTEX-12WSA-0011-R5b-SM-5GU5I 731.6
GTEX-139TT-0011-R5b-SM-5K7W8 691.9
GTEX-ZUA1-0011-R5b-SM-51MTG 677.6
GTEX-T6MN-0011-R5A-SM-32QPD 666.3
GTEX-132Q8-0011-R5a-SM-5IJDM 648.1
GTEX-1399T-0011-R5b-SM-5IJDK 611.8
GTEX-12WSC-0011-R5b-SM-5CVNS 608.0
GTEX-11OF3-0011-R5a-SM-57WB4 586.6
GTEX-13JUV-0011-R5a-SM-5LZY5 581.9
GTEX-UTHO-0011-R5A-SM-3GIJD 578.6
GTEX-T2IS-0011-R5A-SM-32QP4 569.7
GTEX-1313W-0011-R5b-SM-5L3EP 567.4
GTEX-P44H-0011-R5A-SM-2XCEX 548.7
GTEX-11NV4-0011-R5a-SM-5NQ88 545.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 522.3
GTEX-13X6K-0011-R5b-SM-5PNUE 518.8
GTEX-N7MT-0011-R5a-SM-2I3G6 515.2
GTEX-11H98-0011-R5b-SM-57WCF 505.9
GTEX-13G51-0011-R5a-SM-5L3EB 504.3
GTEX-QVJO-0011-R5A-SM-2S1QM 502.2
GTEX-QMR6-0011-R5A-SM-32PKT 499.7
GTEX-131YS-0011-R5b-SM-5K7YB 495.8
GTEX-145MH-0011-R5a-SM-5P9JT 493.8
GTEX-T5JC-0011-R5A-SM-32PLK 492.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 490.1
GTEX-X4XX-0011-R5A-SM-46MWN 486.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 486.2
GTEX-WL46-0011-R5A-SM-3LK6V 486.0
GTEX-Z93S-0011-R5b-SM-4RGNI 474.8
GTEX-13O3O-0011-R5b-SM-5KM44 473.7
GTEX-145LS-0011-R5a-SM-5SI65 473.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 468.4
GTEX-TSE9-0011-R5A-SM-3DB7J 464.3
GTEX-14ABY-0011-R5b-SM-5SI7B 463.7
GTEX-S7SE-0011-R5A-SM-2XCDA 455.1
GTEX-OHPN-0011-R5A-SM-2I5FF 453.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 447.5
GTEX-R55E-0011-R5A-SM-2TC5N 446.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 446.4
GTEX-144GO-0011-R5a-SM-5PNUR 445.0
GTEX-13NYB-0011-R5a-SM-5MR45 443.2
GTEX-12WSF-0011-R5a-SM-5HL8K 437.9
GTEX-13FLW-0011-R5a-SM-5LZX6 435.5
GTEX-13X6I-0011-R5a-SM-5PNWW 431.6
GTEX-N7MS-0011-R5a-SM-2HMK8 430.6
GTEX-RVPU-0011-R5A-SM-2XCAD 428.5
GTEX-13VXU-0011-R5a-SM-5O9D7 424.3
GTEX-13X6J-0011-R5b-SM-5PNWT 419.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 417.3
GTEX-13FLV-0011-R5a-SM-5LZWT 410.3
GTEX-14BIM-0011-R5b-SM-5S2RM 409.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 409.1
GTEX-WHSE-0011-R5A-SM-3P5ZO 408.6
GTEX-WWYW-0011-R5A-SM-3NB3E 407.9
GTEX-11GSP-0011-R5a-SM-57WBE 397.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 395.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 395.4
GTEX-WVLH-0011-R5A-SM-3MJFW 395.2
GTEX-13SLX-0011-R5a-SM-5O9BV 393.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 387.7
GTEX-NPJ7-0011-R5a-SM-33HBK 387.5
GTEX-13CZV-0011-R5a-SM-5K7XA 384.3
GTEX-12WSB-0011-R5b-SM-5GU67 380.4
GTEX-NL4W-0011-R5a-SM-2I3GD 379.1
GTEX-XMD1-0011-R5A-SM-4AT47 377.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 372.4
GTEX-12WSD-0011-R5b-SM-5CVNG 371.9
GTEX-YFC4-0011-R5a-SM-4RGLR 371.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 369.8
GTEX-WZTO-0011-R5B-SM-3NMC5 369.6
GTEX-13FXS-0011-R5b-SM-5LZYE 368.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 364.4
GTEX-12WSH-0011-R5b-SM-5P9F3 363.7
GTEX-PVOW-0011-R5A-SM-32PL7 358.4
GTEX-13OW7-0011-R5b-SM-5O9DM 355.6
GTEX-13OVH-0011-R5b-SM-5KM4L 351.4
GTEX-13OW6-0011-R5a-SM-5O9BK 351.2
GTEX-13OW5-0011-R5b-SM-5L3FR 350.3
GTEX-RU72-0011-R5A-SM-2TF6U 349.8
GTEX-XOTO-0011-R5A-SM-4B657 344.5
GTEX-NL3H-0011-R5a-SM-2I3GB 343.9
GTEX-ZE7O-0011-R5a-SM-57WBO 342.9
GTEX-ZXG5-0011-R5b-SM-57WBN 341.6
GTEX-YJ89-0011-R5a-SM-4V6GM 340.2
GTEX-12ZZX-0011-R5a-SM-5HL89 331.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 331.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 330.5
GTEX-13NYS-0011-R5a-SM-5MR4D 329.5
GTEX-RVPV-0011-R5A-SM-2TF69 325.8
GTEX-11WQC-0011-R5a-SM-5BC74 322.3
GTEX-13OVL-0011-R5b-SM-5L3FU 308.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 304.4
GTEX-13JVG-0011-R5a-SM-5MR4O 303.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 302.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 294.6
GTEX-1477Z-0011-R5b-SM-5PNUO 292.8
GTEX-13CF2-0011-R5a-SM-5LZWS 290.8
GTEX-ZVT3-0011-R5a-SM-51MSI 286.1
GTEX-144GL-0011-R5b-SM-5PNUJ 280.5
GTEX-13S7M-0011-R5b-SM-5P9HS 279.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 272.2
GTEX-14BIN-0011-R5b-SM-5SI78 269.5
GTEX-11UD1-0011-R5b-SM-5P9FP 267.9
GTEX-139T8-0011-R5b-SM-5J1MO 259.5
GTEX-13CIG-0011-R5b-SM-5L3F2 258.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 254.1
GTEX-13FHP-0011-R5b-SM-5LZY2 249.9
GTEX-139TS-0011-R5b-SM-5J2MZ 232.7
GTEX-OXRN-0011-R5A-SM-2I5EF 217.8
GTEX-13112-0011-R5b-SM-5DUV8 217.0
GTEX-X261-0011-R5A-SM-3NMB4 211.9
GTEX-S7PM-0011-R5A-SM-3NM8G 206.8
GTEX-ZV68-0011-R5a-SM-4YCDW 203.7
GTEX-1445S-0011-R5a-SM-5PNUS 200.0
GTEX-145MG-0011-R5b-SM-5S2VU 192.6
GTEX-13NZA-0011-R5b-SM-5KM4K 190.4
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

40.0

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 40.0
FF:10379-105H1 89 years, female 59.6
FF:10164-103B2 76 years, female 20.5

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