Tissue expression of SMIM11A - Staining in colon

COLON - Expression summary

RNA expression

HPA:	4.1	TPM
GTEx:	6.1	RPKM

COLON - Annotated protein expression

Antibody staining	Antibody HPA051321
Endothelial cells	Not detected
Glandular cells	Not detected
Peripheral nerve/ganglion	Not detected

COLON - HPA RNA-seq

Average TPM	4.1

Male, age 54

Sample 1
TPM: 0.0

Cell types%

Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25

Female, age 57

Sample 2
TPM: 8.3

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 80

Sample 3
TPM: 3.1

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 68

Sample 4
TPM: 0.0

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 68

Sample 5
TPM: 4.0

Cell types%

Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70

Female, age 61

Sample 6
TPM: 8.0

Cell types%

Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30

Male, age 80

Sample 7
TPM: 10.7

Cell types%

Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

Female, age 78

Sample 8
TPM: 0.0

Cell types%

Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50

Male, age 84

Sample 9
TPM: 0.0

Cell types%

Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35

Male, age 80

Sample 10
TPM: 10.4

Cell types%

Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45

Female, age 78

Sample 11
TPM: 4.7

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 69

Sample 12
TPM: 0.0

Cell types%

Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45

Female, age 72

Sample 13
TPM: 4.4

Cell types%

Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM	6.1

GTEx sample id

RPKM

Colon - Sigmoid

Colon - Sigmoid
RPKM: 7.8

Samples: 149

Max RPKM: 13.3
Min RPKM: 4.3
Std RPKM: 1.5
Median RPKM: 7.8

GTEX-ZAJG-2626-SM-5S2NU

13.3

GTEX-ZYT6-2826-SM-5GICX

11.9

GTEX-1477Z-2126-SM-5Q5CM

11.7

GTEX-1399U-2226-SM-5KLZI

11.2

GTEX-147GR-2826-SM-5RQK8

11.0

GTEX-Z93S-2626-SM-57WBX

10.8

GTEX-XV7Q-2226-SM-4BRVY

10.6

GTEX-145LS-2926-SM-5O99G

10.0

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Colon - Transverse

Colon - Transverse
RPKM: 4.8

Samples: 196

Max RPKM: 10.6
Min RPKM: 1.8
Std RPKM: 1.9
Median RPKM: 4.3

GTEX-11TTK-2426-SM-5PNYO

10.6

GTEX-11O72-2226-SM-5PNW2

9.3

GTEX-145LS-2726-SM-5Q5D8

9.2

GTEX-Z93S-2426-SM-5HL8N

9.2

GTEX-13U4I-2426-SM-5LU34

9.1

GTEX-V955-1626-SM-4JBHJ

9.1

GTEX-XXEK-1926-SM-4BRVD

9.0

GTEX-13FHP-2426-SM-5KLZ5

8.6

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COLON - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue