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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:91.2TPM
GTEx:11.5RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Medium
Neuronal cells:Not detected
Neuropil:Not detected
 

Antibody staining

Antibody HPA003254

 

Antibody CAB019381

 

Endothelial cells

Not detected   Not detected  

Glial cells

Low   Medium  

Neuronal cells

Not detected   Not detected  

Neuropil

Not detected   Not detected  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

91.2

N/A Male, age 5
Sample 1
TPM: 52.4
overview Female, age 40
Sample 2
TPM: 187.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 34.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

11.5

GTEx sample id

RPKM

8.610.414.82.923.705101520253035
 
8.610.414.82.923.705101520253035

Brain - Cortex

Brain - Cortex
RPKM: 12.4
Samples: 114

Max RPKM: 38.1
Min RPKM: 2.9
Std RPKM: 6.1
Median RPKM: 10.5
GTEX-13PVQ-3026-SM-5SI93 38.1
GTEX-13G51-3026-SM-5IJB8 34.2
GTEX-11GS4-3126-SM-5A5LH 30.2
GTEX-13OVJ-2826-SM-5L3GW 26.9
GTEX-13NYB-3026-SM-5IJD7 26.6
GTEX-1192X-3126-SM-5N9BY 24.5
GTEX-13FHP-3026-SM-5IJBS 23.7
GTEX-WHSE-3026-SM-3P5ZH 23.5
GTEX-N7MT-1126-SM-5SI7V 23.3
GTEX-11GSP-3226-SM-5986O 22.1
GTEX-12ZZY-3026-SM-5GCOU 22.0
GTEX-11ONC-2926-SM-5P9JM 21.7
GTEX-13FHO-3026-SM-5J1O9 21.1
GTEX-12WSD-3126-SM-5HL7P 19.2
GTEX-1445S-3026-SM-5O9BR 18.0
GTEX-XOTO-3026-SM-4B65M 18.0
GTEX-13OW8-2826-SM-5L3GC 17.1
GTEX-12WSA-2926-SM-5EQ4D 17.0
GTEX-13OW7-3026-SM-5L3GY 17.0
GTEX-QVUS-2826-SM-3GADB 16.9
GTEX-13JVG-3126-SM-5L3FH 16.7
GTEX-1313W-3126-SM-5LZUI 16.4
GTEX-111FC-3126-SM-5GZZ2 15.8
GTEX-13FLW-1426-SM-5K7YE 15.7
GTEX-13OVH-3026-SM-5MR4N 15.5
GTEX-QDT8-2926-SM-32PKC 15.2
GTEX-13IVO-2926-SM-5L3CZ 15.1
GTEX-XLM4-3026-SM-4AT6L 14.9
GTEX-13SLX-3126-SM-5S2Q5 14.8
GTEX-144FL-3026-SM-5O99C 14.7
GTEX-12ZZZ-3026-SM-5BC67 14.5
GTEX-UTHO-3026-SM-3GAFB 14.1
GTEX-145MG-3026-SM-5RQJA 13.8
GTEX-13QIC-2926-SM-5J2NF 13.7
GTEX-145LS-3126-SM-5Q5BY 13.7
GTEX-11EI6-3026-SM-5GZZO 13.5
GTEX-PWO3-0926-SM-2I5EY 13.5
GTEX-1117F-3226-SM-5N9CT 13.3
GTEX-11TTK-2926-SM-5PNYP 13.1
GTEX-1399T-3026-SM-5KLZC 12.4
GTEX-NPJ8-1526-SM-2D7VU 12.4
GTEX-12ZZW-2926-SM-5LZUP 12.3
GTEX-11DXY-3226-SM-5GIDE 12.2
GTEX-13OW6-3026-SM-5J2MI 12.2
GTEX-11GSO-2926-SM-5HL73 12.0
GTEX-139T8-1026-SM-5J2MC 12.0
GTEX-12WSH-3026-SM-5CVNI 11.6
GTEX-13O3O-3126-SM-5KM3H 11.6
GTEX-T6MN-2626-SM-32PMQ 11.6
GTEX-WL46-2926-SM-3LK82 11.6
GTEX-117XS-3026-SM-5N9CA 11.5
GTEX-12126-1026-SM-5P9JJ 11.2
GTEX-Y8DK-0826-SM-4TT3T 11.0
GTEX-ZAK1-3026-SM-5S2MJ 10.9
GTEX-14BMV-3026-SM-5S2PQ 10.7
GTEX-ZAJG-3126-SM-5HL9J 10.7
GTEX-147GR-3026-SM-5S2ML 10.5
GTEX-14ASI-3026-SM-5S2PN 10.4
GTEX-ZE7O-3126-SM-5HL5X 10.4
GTEX-131XW-3126-SM-5LZUC 10.3
GTEX-13S7M-3126-SM-5RQJQ 10.3
GTEX-ZVT3-3026-SM-5E43N 10.3
GTEX-11EMC-3226-SM-5EGKW 10.2
GTEX-14A5I-2926-SM-5Q5CQ 10.2
GTEX-145MF-2726-SM-5O995 10.1
GTEX-X4XX-3026-SM-3NMB2 10.1
GTEX-13JUV-2926-SM-5LZX7 10.0
GTEX-144GL-3026-SM-5Q5CW 10.0
GTEX-RU72-3026-SM-5SI7Y 10.0
GTEX-1128S-2726-SM-5H12C 9.9
GTEX-131YS-3126-SM-5KLYT 9.9
GTEX-Q2AG-2926-SM-2HMJ3 9.9
GTEX-YFC4-3126-SM-5PNV6 9.9
GTEX-11NUK-2926-SM-5A5MD 9.6
GTEX-13PL6-3126-SM-5LUAR 9.6
GTEX-ZUA1-3026-SM-59HJC 9.6
GTEX-11NV4-2126-SM-5N9DS 9.5
GTEX-QMR6-1426-SM-32PLA 9.4
GTEX-ZZPT-3026-SM-5GZXH 9.3
GTEX-11DXW-1126-SM-5H12Q 9.2
GTEX-12ZZX-2926-SM-5GCOQ 9.2
GTEX-WVLH-3026-SM-3MJG9 9.2
GTEX-T5JC-2426-SM-3NMDB 9.1
GTEX-TSE9-3026-SM-3DB76 8.7
GTEX-11PRG-2926-SM-5987A 8.6
GTEX-Z93S-2926-SM-57WB9 8.6
GTEX-13X6J-3026-SM-5Q5CU 8.5
GTEX-13X6K-2926-SM-5Q5D5 8.3
GTEX-QVJO-1426-SM-2S1QY 8.3
GTEX-NPJ7-2726-SM-2I3FT 8.2
GTEX-OXRN-2426-SM-2I5EQ 8.2
GTEX-12WSC-3026-SM-5GCNF 8.1
GTEX-13O3Q-2926-SM-5KM45 8.1
GTEX-YJ89-3026-SM-5IFJI 8.1
GTEX-13VXU-2926-SM-5LU5C 8.0
GTEX-RNOR-2326-SM-2TF4I 7.8
GTEX-145MH-3026-SM-5Q5DZ 7.3
GTEX-Y111-2726-SM-4TT3N 7.3
GTEX-T2IS-3026-SM-32QPM 7.2
GTEX-13FXS-3126-SM-5J2NN 6.9
GTEX-11OC5-0726-SM-5P9JK 6.8
GTEX-11ZUS-2926-SM-5FQSL 6.8
GTEX-132Q8-3026-SM-5PNVG 6.4
GTEX-R55F-1326-SM-5S2V4 6.4
GTEX-X585-3026-SM-46MWF 6.4
GTEX-11O72-2926-SM-5BC4V 6.3
GTEX-WZTO-2926-SM-3NM9I 6.3
GTEX-PVOW-2526-SM-2XCF7 5.4
GTEX-11WQK-3026-SM-5EQL6 5.3
GTEX-ZYFD-3026-SM-5E44C 4.8
GTEX-13NYS-3126-SM-5KLYV 4.3
GTEX-11OF3-2926-SM-5HL78 3.5
GTEX-13NYC-2826-SM-5K7WR 3.0
GTEX-WWYW-3126-SM-3NB39 2.9
Show all
7.69.412.13.117.6051015202530
 
7.69.412.13.117.6051015202530

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 10.5
Samples: 108

Max RPKM: 32.5
Min RPKM: 3.1
Std RPKM: 4.8
Median RPKM: 9.4
GTEX-ZE7O-0011-R10a-SM-57WAZ 32.5
GTEX-13JVG-0011-R10b-SM-5KM2P 26.9
GTEX-12WSD-0011-R10b-SM-5GU79 25.5
GTEX-11GSP-0011-R10a-SM-5NQ7J 23.1
GTEX-12WSA-0011-R10b-SM-5P9ET 19.8
GTEX-XMD1-0011-R10A-SM-4AT4A 19.2
GTEX-145LU-0011-R10a-SM-5PNWJ 17.6
GTEX-1445S-0011-R10a-SM-5PNWB 17.5
GTEX-13OVL-0011-R10a-SM-5L3GS 17.4
GTEX-13FLW-0011-R10b-SM-5LZZF 16.9
GTEX-RVPU-0011-R10A-SM-2XCAH 16.8
GTEX-X261-0011-R10B-SM-4E3JT 16.8
GTEX-13N1W-0011-R10b-SM-5MR4H 16.4
GTEX-ZV68-0011-R10a-SM-51MT7 16.4
GTEX-ZDXO-0011-R10a-SM-4WWD8 15.9
GTEX-13CZV-0011-R10b-SM-5LZYD 15.5
GTEX-13X6K-0011-R10a-SM-5P9JR 15.2
GTEX-XLM4-0011-R10A-SM-4AT5P 14.9
GTEX-13FLV-0011-R10b-SM-5LZZ2 14.8
GTEX-14BIL-0011-R10a-SM-5SI75 13.7
GTEX-13O3O-0011-R10a-SM-5LUA9 13.6
GTEX-11WQC-0011-R10a-SM-57WCT 13.1
GTEX-13SLW-0011-R10a-SM-5S2UI 13.0
GTEX-N7MT-0011-R10A-SM-2I3E1 12.9
GTEX-ZVZQ-0011-R10b-SM-51MRT 12.7
GTEX-13X6I-0011-R10a-SM-5PNWI 12.4
GTEX-NL4W-0011-R10A-SM-2I3DY 12.3
GTEX-12126-0011-R10b-SM-5BC6T 12.0
GTEX-ZXG5-0011-R10a-SM-57WDD 12.0
GTEX-131XW-0011-R10a-SM-5DUVA 11.9
GTEX-12WSH-0011-R10a-SM-5LZUS 11.0
GTEX-13QJC-0011-R10a-SM-5SI63 11.0
GTEX-1477Z-0011-R10b-SM-5S2RF 10.8
GTEX-ZAB4-0011-R10a-SM-4SOKH 10.8
GTEX-13OVJ-0011-R10b-SM-5L3HT 10.7
GTEX-ZUA1-0011-R10a-SM-51MT6 10.7
GTEX-12ZZY-0011-R10b-SM-5HL7W 10.5
GTEX-145MG-0011-R10a-SM-5PNWG 10.5
GTEX-145LS-0011-R10a-SM-5PNUQ 10.3
GTEX-147GR-0011-R10b-SM-5S2UM 10.2
GTEX-TSE9-0011-R10A-SM-3DB7O 10.2
GTEX-QDT8-0011-R10A-SM-32PKG 10.1
GTEX-13IVO-0011-R10a-SM-5LZY3 10.0
GTEX-12WSM-0011-R10a-SM-5DUWV 9.9
GTEX-13NZA-0011-R10b-SM-5KM54 9.8
GTEX-13S7M-0011-R10b-SM-5PNZB 9.8
GTEX-S7SE-0011-R10A-SM-2XCDF 9.8
GTEX-13QIC-0011-R10a-SM-5O9C7 9.7
GTEX-X4XX-0011-R10B-SM-46MWO 9.7
GTEX-ZVT3-0011-R10b-SM-57WB6 9.7
GTEX-12ZZW-0011-R10b-SM-5HL9X 9.5
GTEX-131YS-0011-R10b-SM-5EQ5N 9.5
GTEX-147F4-0011-R10b-SM-5S2WC 9.5
GTEX-13RTJ-0011-R10b-SM-5O9CW 9.4
GTEX-13JUV-0011-R10b-SM-5LZXR 9.3
GTEX-13OW8-0011-R10a-SM-5L3H6 9.3
GTEX-13SLX-0011-R10a-SM-5P9HV 9.3
GTEX-WVLH-0011-R10A-SM-3MJFM 9.3
GTEX-12ZZZ-0011-R10a-SM-5P9HC 9.2
GTEX-YFC4-0011-R10a-SM-4SOK5 9.2
GTEX-QVJO-0011-R10A-SM-2S1QJ 9.1
GTEX-12ZZX-0011-R10b-SM-5DUWK 9.0
GTEX-13OW7-0011-R10a-SM-5L3H3 9.0
GTEX-OXRO-0011-R10A-SM-2I5EH 9.0
GTEX-131XH-0011-R10a-SM-5EGLJ 8.8
GTEX-14ASI-0011-R10b-SM-5S2VZ 8.8
GTEX-13FHO-0011-R10b-SM-5J2MM 8.7
GTEX-Q2AG-0011-R10A-SM-2HMLA 8.7
GTEX-T5JC-0011-R10A-SM-32PM2 8.6
GTEX-13FTZ-0011-R10b-SM-5KLZS 8.5
GTEX-Z93S-0011-R10a-SM-4RGNM 8.5
GTEX-139TS-0011-R10a-SM-5K7TU 8.4
GTEX-14753-0011-R10b-SM-5S2WE 8.4
GTEX-13NYB-0011-R10a-SM-5KM43 8.3
GTEX-OXRN-0011-R10A-SM-2I5GC 8.3
GTEX-NPJ8-0011-R10A-SM-2YUMO 8.2
GTEX-P44H-0011-R10A-SM-2XCEK 8.1
GTEX-12WSC-0011-R10a-SM-5GU57 8.0
GTEX-13O3Q-0011-R10b-SM-5KM39 7.9
GTEX-Y8DK-0011-R10A-SM-4SOK1 7.9
GTEX-132Q8-0011-R10b-SM-5DUWZ 7.6
GTEX-145MH-0011-R10b-SM-5PNUK 7.5
GTEX-N7MS-0011-R10A-SM-2HMJK 7.5
GTEX-WZTO-0011-R10B-SM-4E3KB 7.2
GTEX-13N2G-0011-R10a-SM-5MR34 7.1
GTEX-13OW6-0011-R10a-SM-5L3HE 7.0
GTEX-QVUS-0011-R10A-SM-3GIK3 7.0
GTEX-ZF28-0011-R10a-SM-4WWEH 7.0
GTEX-13G51-0011-R10b-SM-5LZYF 6.9
GTEX-T6MN-0011-R10A-SM-32QP7 6.9
GTEX-13FXS-0011-R10a-SM-5J2MA 6.6
GTEX-1313W-0011-R10b-SM-5DUXA 6.3
GTEX-13X6J-0011-R10b-SM-5PNWA 6.3
GTEX-14BIN-0011-R10a-SM-5S2UA 6.3
GTEX-YJ89-0011-R10a-SM-4SOK9 6.2
GTEX-12WSF-0011-R10a-SM-5LZVH 6.0
GTEX-QMR6-0011-R10A-SM-32PKO 5.9
GTEX-11H98-0011-R10b-SM-5NQ98 5.7
GTEX-X585-0011-R10A-SM-46MUY 5.4
GTEX-11WQK-0011-R10a-SM-5BC6R 5.2
GTEX-NPJ7-0011-R10A-SM-2I3E5 5.1
GTEX-11ZUS-0011-R10b-SM-5BC79 4.9
GTEX-NL3H-0011-R10A-SM-2I3E9 4.9
GTEX-X4EP-0011-R10B-SM-4QASJ 4.7
GTEX-WWYW-0011-R10A-SM-3NB35 4.4
GTEX-WL46-0011-R10A-SM-3MJFQ 4.1
GTEX-13NYS-0011-R10a-SM-5MR4S 3.4
GTEX-12WSE-0011-R10b-SM-5P9JV 3.1
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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