We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
RAB12
  • TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:17.5RPKM
FANTOM5:101.0Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:High
 

Antibody staining

Antibody HPA040727

 

Glial cells

Low  

Neuronal cells

High  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

17.5

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 17.5
Samples: 117

Max RPKM: 36.1
Min RPKM: 5.7
Std RPKM: 5.3
Median RPKM: 17.8
GTEX-T2IS-0011-R5A-SM-32QP4 36.1
GTEX-P44H-0011-R5A-SM-2XCEX 34.9
GTEX-QVJO-0011-R5A-SM-2S1QM 28.2
GTEX-X585-0011-R5A-SM-46MVI 27.9
GTEX-PVOW-0011-R5A-SM-32PL7 27.7
GTEX-UTHO-0011-R5A-SM-3GIJD 26.9
GTEX-1399T-0011-R5b-SM-5IJDK 24.8
GTEX-12WSF-0011-R5a-SM-5HL8K 24.7
GTEX-XMD1-0011-R5A-SM-4AT47 24.7
GTEX-T6MN-0011-R5A-SM-32QPD 24.4
GTEX-139TT-0011-R5b-SM-5K7W8 23.9
GTEX-WVLH-0011-R5A-SM-3MJFW 23.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 23.5
GTEX-WWYW-0011-R5A-SM-3NB3E 23.4
GTEX-11OF3-0011-R5a-SM-57WB4 23.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 23.3
GTEX-12WSC-0011-R5b-SM-5CVNS 23.1
GTEX-13G51-0011-R5a-SM-5L3EB 23.0
GTEX-S7SE-0011-R5A-SM-2XCDA 22.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 21.9
GTEX-N7MS-0011-R5a-SM-2HMK8 21.8
GTEX-131YS-0011-R5b-SM-5K7YB 21.3
GTEX-13X6J-0011-R5b-SM-5PNWT 21.2
GTEX-R55E-0011-R5A-SM-2TC5N 21.0
GTEX-ZUA1-0011-R5b-SM-51MTG 21.0
GTEX-N7MT-0011-R5a-SM-2I3G6 20.8
GTEX-13X6I-0011-R5a-SM-5PNWW 20.6
GTEX-QMR6-0011-R5A-SM-32PKT 20.6
GTEX-132Q8-0011-R5a-SM-5IJDM 20.4
GTEX-12WSB-0011-R5b-SM-5GU67 20.2
GTEX-145MH-0011-R5a-SM-5P9JT 20.2
GTEX-14BIM-0011-R5b-SM-5S2RM 20.2
GTEX-RVPV-0011-R5A-SM-2TF69 20.2
GTEX-13JUV-0011-R5a-SM-5LZY5 20.1
GTEX-WL46-0011-R5A-SM-3LK6V 20.0
GTEX-1313W-0011-R5b-SM-5L3EP 19.8
GTEX-WZTO-0011-R5B-SM-3NMC5 19.8
GTEX-Z93S-0011-R5b-SM-4RGNI 19.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 19.4
GTEX-14ABY-0011-R5b-SM-5SI7B 19.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 19.4
GTEX-145LS-0011-R5a-SM-5SI65 19.3
GTEX-WHSE-0011-R5A-SM-3P5ZO 19.3
GTEX-OHPN-0011-R5A-SM-2I5FF 19.2
GTEX-11H98-0011-R5b-SM-57WCF 18.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 18.9
GTEX-13X6K-0011-R5b-SM-5PNUE 18.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 18.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 18.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 18.3
GTEX-T5JC-0011-R5A-SM-32PLK 18.3
GTEX-13OW6-0011-R5a-SM-5O9BK 18.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 18.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 18.1
GTEX-11GSP-0011-R5a-SM-57WBE 17.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 17.9
GTEX-11NV4-0011-R5a-SM-5NQ88 17.8
GTEX-13FLW-0011-R5a-SM-5LZX6 17.8
GTEX-13O3O-0011-R5b-SM-5KM44 17.8
GTEX-13FXS-0011-R5b-SM-5LZYE 17.7
GTEX-13VXU-0011-R5a-SM-5O9D7 17.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 17.4
GTEX-13SLX-0011-R5a-SM-5O9BV 17.4
GTEX-RU72-0011-R5A-SM-2TF6U 17.4
GTEX-RVPU-0011-R5A-SM-2XCAD 17.2
GTEX-12WSA-0011-R5b-SM-5GU5I 17.0
GTEX-NL4W-0011-R5a-SM-2I3GD 16.9
GTEX-13NYB-0011-R5a-SM-5MR45 16.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 16.7
GTEX-13NYS-0011-R5a-SM-5MR4D 16.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 16.6
GTEX-13CZV-0011-R5a-SM-5K7XA 16.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 16.5
GTEX-13FLV-0011-R5a-SM-5LZWT 16.0
GTEX-ZE7O-0011-R5a-SM-57WBO 16.0
GTEX-13OVL-0011-R5b-SM-5L3FU 15.9
GTEX-NL3H-0011-R5a-SM-2I3GB 15.9
GTEX-TSE9-0011-R5A-SM-3DB7J 15.2
GTEX-X261-0011-R5A-SM-3NMB4 15.2
GTEX-X4XX-0011-R5A-SM-46MWN 15.2
GTEX-12WSD-0011-R5b-SM-5CVNG 15.1
GTEX-13JVG-0011-R5a-SM-5MR4O 15.1
GTEX-13OW7-0011-R5b-SM-5O9DM 15.0
GTEX-YFC4-0011-R5a-SM-4RGLR 14.9
GTEX-12ZZX-0011-R5a-SM-5HL89 14.1
GTEX-144GO-0011-R5a-SM-5PNUR 14.0
GTEX-13S7M-0011-R5b-SM-5P9HS 13.8
GTEX-139TS-0011-R5b-SM-5J2MZ 13.6
GTEX-14BIN-0011-R5b-SM-5SI78 13.2
GTEX-OXRN-0011-R5A-SM-2I5EF 12.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 12.8
GTEX-ZXG5-0011-R5b-SM-57WBN 12.8
GTEX-XOTO-0011-R5A-SM-4B657 12.7
GTEX-13OW5-0011-R5b-SM-5L3FR 12.6
GTEX-13OVH-0011-R5b-SM-5KM4L 12.5
GTEX-13CIG-0011-R5b-SM-5L3F2 12.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 11.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 11.6
GTEX-1445S-0011-R5a-SM-5PNUS 11.5
GTEX-11WQC-0011-R5a-SM-5BC74 11.4
GTEX-12WSH-0011-R5b-SM-5P9F3 11.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 11.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 11.0
GTEX-NPJ7-0011-R5a-SM-33HBK 11.0
GTEX-ZVT3-0011-R5a-SM-51MSI 11.0
GTEX-144GL-0011-R5b-SM-5PNUJ 10.2
GTEX-S7PM-0011-R5A-SM-3NM8G 10.2
GTEX-13112-0011-R5b-SM-5DUV8 10.1
GTEX-YJ89-0011-R5a-SM-4V6GM 9.9
GTEX-11UD1-0011-R5b-SM-5P9FP 9.6
GTEX-ZV68-0011-R5a-SM-4YCDW 9.5
GTEX-13FHP-0011-R5b-SM-5LZY2 9.0
GTEX-139T8-0011-R5b-SM-5J1MO 8.7
GTEX-1477Z-0011-R5b-SM-5PNUO 8.3
GTEX-13CF2-0011-R5a-SM-5LZWS 7.3
GTEX-145MG-0011-R5b-SM-5S2VU 6.1
GTEX-13NZA-0011-R5b-SM-5KM4K 5.7
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

101.0

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 101.0
FF:10164-103B2 76 years, female 101.9
FF:10379-105H1 89 years, female 100.1

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.