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TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:17.3RPKM
FANTOM5:87.6Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:High
 

Antibody staining

Antibody HPA040727

 

Glial cells

Low  

Neuronal cells

High  
 
 
 

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

17.3

GTEx sample id

RPKM

 

Brain - Hippocampus

Brain - Hippocampus
RPKM: 17.3
Samples: 94

Max RPKM: 38.7
Min RPKM: 4.2
Std RPKM: 6.7
Median RPKM: 17
GTEX-13O3O-0011-R1b-SM-5KM2K 38.7
GTEX-131XH-0011-R1a-SM-5DUWA 32.4
GTEX-X585-0011-R1B-SM-46MVE 31.7
GTEX-12WSE-0011-R1b-SM-5GU4V 28.0
GTEX-QVJO-0011-R1A-SM-2S1QI 27.3
GTEX-R55E-0011-R1A-SM-2TC6N 27.1
GTEX-QVUS-0011-R1A-SM-3GAD2 26.9
GTEX-QDT8-0011-R1A-SM-32PKS 26.6
GTEX-PVOW-0011-R1A-SM-32PL6 26.6
GTEX-N7MS-0011-R1a-SM-2HMJG 26.5
GTEX-145MH-0011-R1b-SM-5PNWY 26.5
GTEX-P44H-0011-R1A-SM-3NM8J 25.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 25.0
GTEX-WWYW-0011-R1A-SM-3TW8G 24.3
GTEX-T6MN-0011-R1A-SM-32QOY 24.3
GTEX-RNOR-0011-R1A-SM-5SI8F 24.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 23.9
GTEX-13N1W-0011-R1b-SM-5MR4T 23.9
GTEX-13JUV-0011-R1a-SM-5LZY4 23.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 23.7
GTEX-WL46-0011-R1A-SM-3LK6M 23.7
GTEX-QMR6-0011-R1A-SM-32PKW 22.6
GTEX-13FLW-0011-R1b-SM-5LZX2 22.5
GTEX-13G51-0011-R1a-SM-5LZYR 22.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 21.6
GTEX-ZAB4-0011-R1a-SM-4RGNO 21.4
GTEX-WZTO-0011-R1B-SM-3NMAR 21.3
GTEX-12WSH-0011-R1a-SM-5GU5V 21.2
GTEX-12WSF-0011-R1a-SM-5DUVI 21.1
GTEX-139TT-0011-R1a-SM-5LZVD 21.0
GTEX-YFC4-0011-R1a-SM-4V6EH 20.0
GTEX-144GL-0011-R1a-SM-5PNZ5 19.7
GTEX-13RTJ-0011-R1a-SM-5O9D9 19.3
GTEX-13X6I-0011-R1b-SM-5PNZC 19.1
GTEX-13FXS-0011-R1a-SM-5K7U6 19.0
GTEX-ZUA1-0011-R1a-SM-4YCE2 19.0
GTEX-N7MT-0011-R1a-SM-5SI7S 18.7
GTEX-13N2G-0011-R1b-SM-5MR3G 18.6
GTEX-PWO3-0011-R1A-SM-2I5EW 18.6
GTEX-UTHO-0011-R1A-SM-3GIJO 18.5
GTEX-NPJ7-0011-R1a-SM-3GACT 18.4
GTEX-XOTO-0011-R1B-SM-4B65C 18.1
GTEX-X4XX-0011-R1B-SM-3P622 17.8
GTEX-T5JC-0011-R1A-SM-32PM6 17.7
GTEX-13NYB-0011-R1b-SM-5KM4F 17.5
GTEX-S7SE-0011-R1A-SM-2XCDE 17.4
GTEX-13OW6-0011-R1a-SM-5L3HQ 17.1
GTEX-NPJ8-0011-R1a-SM-33HCB 17.0
GTEX-12WSD-0011-R1b-SM-5LZVY 17.0
GTEX-14ASI-0011-R1b-SM-5S2TY 16.8
GTEX-1313W-0011-R1b-SM-5EQ4A 16.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 16.1
GTEX-13FHO-0011-R1b-SM-5KLZG 16.0
GTEX-131YS-0011-R1a-SM-5DUXC 15.5
GTEX-13NYS-0011-R1b-SM-5MR55 15.5
GTEX-13OW7-0011-R1b-SM-5L3HF 15.0
GTEX-WVLH-0011-R1A-SM-4MVOK 14.6
GTEX-Y8DK-0011-R1A-SM-4RGLO 14.5
GTEX-TSE9-0011-R1A-SM-3DB7E 14.2
GTEX-13SLW-0011-R1a-SM-5S2W7 14.1
GTEX-1399T-0011-R1b-SM-5DUWN 14.1
GTEX-145LS-0011-R1b-SM-5PNUP 14.0
GTEX-12WSM-0011-R1a-SM-5LZW6 14.0
GTEX-11UD1-0011-R1b-SM-5BC7D 13.8
GTEX-XMD1-0011-R1A-SM-4AT4C 13.5
GTEX-13OVL-0011-R1a-SM-5L3H5 13.4
GTEX-132Q8-0011-R1a-SM-5EGLK 13.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 13.3
GTEX-13112-0011-R1b-SM-5HL7K 13.0
GTEX-13OW5-0011-R1b-SM-5L3GE 12.6
GTEX-11GSO-0011-R1b-SM-57WD3 12.4
GTEX-11ONC-0011-R1a-SM-57WD4 12.1
GTEX-NL3H-0011-R1a-SM-48TDJ 11.3
GTEX-13PDP-0011-R1a-SM-5PNX5 11.2
GTEX-139T8-0011-R1a-SM-5HL75 11.2
GTEX-13OW8-0011-R1a-SM-5L3HI 11.0
GTEX-YJ89-0011-R1a-SM-4RGLS 10.6
GTEX-13JVG-0011-R1a-SM-5KM32 10.5
GTEX-11ZVC-0011-R1b-SM-5BC6M 10.5
GTEX-13S7M-0011-R1b-SM-5PNZE 10.4
GTEX-13QJC-0011-R1b-SM-5S2UU 10.4
GTEX-11ZTS-0011-R1a-SM-5BC71 10.4
GTEX-1212Z-0011-R1b-SM-5BC72 10.3
GTEX-ZVZQ-0011-R1a-SM-57WBU 8.7
GTEX-145LU-0011-R1a-SM-5Q5CE 8.6
GTEX-13RTL-0011-R1a-SM-5PNZ8 8.0
GTEX-12WSB-0011-R1b-SM-5P9EY 7.9
GTEX-13NZA-0011-R1b-SM-5LUAF 7.7
GTEX-13CF2-0011-R1a-SM-5LZY1 7.5
GTEX-144GO-0011-R1a-SM-5PNWO 6.6
GTEX-ZF28-0011-R1a-SM-4WWD1 6.4
GTEX-13FHP-0011-R1b-SM-5K7XL 6.1
GTEX-ZE7O-0011-R1a-SM-57WDM 4.3
GTEX-13FTY-0011-R1a-SM-5LZXE 4.2
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

87.6

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 87.6
FF:10153-102I9 76 years, female 92.4
FF:10374-105G5 89 years, female 91.1
FF:10169-103B7 60 years, female 79.4

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.