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Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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RAB12
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TISSUE ATLAS PRIMARY DATA PROSTATE

GENE/PROTEIN

Antibody validation


Dictionary

Prostate

Tissue proteome

Prostate

PROSTATE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:36.2TPM
GTEx:17.8RPKM
FANTOM5:84.4Tags Per Million

PROSTATE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA040727

 

Glandular cells

Medium  
 
 
 

PROSTATE - HPA RNA-seq

Average TPM

36.2

overview Male, age 62
Sample 1
TPM: 44.9
Cell types%
Glandular cells: 30
Smooth muscle cells: 55
Skeletal muscle cells: 5
Other cell types: 10
N/A Male, age 65
Sample 2
TPM: 31.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 60
Other cell types: 20
overview Male, age 65
Sample 3
TPM: 25.5
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 68
Sample 4
TPM: 28.1
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 60
Sample 5
TPM: 50.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 55
Other cell types: 5
overview Male, age 66
Sample 6
TPM: 27.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 45
Other cell types: 5
overview Male, age 63
Sample 7
TPM: 32.3
Cell types%
Glandular cells: 60
Smooth muscle cells: 35
Other cell types: 5
overview Male, age 66
Sample 8
TPM: 28.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 30
Other cell types: 5
overview Male, age 58
Sample 9
TPM: 61.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 50
Other cell types: 5

PROSTATE - GTEx RNA-seq

Average RPKM

17.8

GTEx sample id

RPKM

 

Prostate

Prostate
RPKM: 17.8
Samples: 106

Max RPKM: 33.1
Min RPKM: 7.1
Std RPKM: 5.1
Median RPKM: 17.2
GTEX-14C5O-2826-SM-5RQI6 33.1
GTEX-11EQ9-1726-SM-5HL6U 33.0
GTEX-12696-2226-SM-5EQ65 30.8
GTEX-12BJ1-1226-SM-5LUAE 28.3
GTEX-ZLFU-1726-SM-4WWBU 27.2
GTEX-OOBJ-2026-SM-3NB1R 26.7
GTEX-13RTJ-2126-SM-5S2PZ 26.4
GTEX-131XF-1926-SM-5DUW4 26.3
GTEX-13NYS-1026-SM-5KLZT 25.8
GTEX-ZVP2-0826-SM-59HJ6 25.3
GTEX-VJYA-1226-SM-3GIJ6 25.0
GTEX-WK11-2626-SM-4OOSK 24.5
GTEX-13111-1326-SM-5GCNO 23.7
GTEX-ZTTD-2726-SM-57WFA 23.5
GTEX-U8XE-2526-SM-4E3IT 23.0
GTEX-ZPU1-2026-SM-57WFI 23.0
GTEX-S3XE-1326-SM-4AD4H 22.8
GTEX-11P7K-0626-SM-5985Z 22.1
GTEX-11WQK-2726-SM-5EQMU 21.8
GTEX-OOBK-2025-SM-3LK5S 21.7
GTEX-NPJ8-2426-SM-3MJHL 21.4
GTEX-SNOS-1026-SM-4DM4Y 21.4
GTEX-111YS-1726-SM-5GIED 21.1
GTEX-1399T-1226-SM-5P9J5 21.1
GTEX-13N2G-1826-SM-5KM1I 21.1
GTEX-XAJ8-0626-SM-47JY4 21.0
GTEX-14ABY-0726-SM-5Q5DF 20.9
GTEX-148VJ-1826-SM-5Q5DV 20.8
GTEX-WFG7-1826-SM-3GIL1 20.8
GTEX-11O72-2726-SM-5HL6K 20.5
GTEX-12ZZZ-2026-SM-5LZWJ 20.3
GTEX-13FHO-2826-SM-5K7ZA 20.2
GTEX-V955-1826-SM-4JBIL 20.1
GTEX-132QS-1126-SM-5P9GC 19.9
GTEX-Y9LG-1826-SM-4VBQC 19.9
GTEX-T8EM-1826-SM-4DM7F 19.8
GTEX-UTHO-2726-SM-4JBH9 19.8
GTEX-11OF3-1726-SM-5GU5Q 19.3
GTEX-13O21-1126-SM-5N9EV 19.3
GTEX-YF7O-1926-SM-4W1YQ 19.0
GTEX-XGQ4-1826-SM-4AT6F 18.9
GTEX-145LV-1226-SM-5S2QH 18.8
GTEX-111CU-1526-SM-5N9FS 18.7
GTEX-U412-2026-SM-4DXSI 18.6
GTEX-ZT9W-1626-SM-4YCDQ 18.5
GTEX-WOFM-0326-SM-4OOSL 18.4
GTEX-11ZUS-2126-SM-5N9E6 18.3
GTEX-QV44-1526-SM-4R1KI 18.3
GTEX-11P82-1126-SM-5BC5K 17.9
GTEX-QEG4-2226-SM-4R1JM 17.4
GTEX-QMRM-1426-SM-4R1K8 17.4
GTEX-13O61-1726-SM-5KM46 17.3
GTEX-13OW8-0426-SM-5J2NR 17.2
GTEX-RM2N-1126-SM-48FCY 17.1
GTEX-1399R-0526-SM-5IJEF 17.0
GTEX-QLQ7-1326-SM-4R1JY 16.9
GTEX-XPVG-2026-SM-4B65E 16.9
GTEX-11DYG-2526-SM-5N9BB 16.8
GTEX-12C56-1326-SM-5FQSV 16.8
GTEX-117YX-1526-SM-5H12T 16.6
GTEX-S95S-1026-SM-4B64M 16.6
GTEX-WFON-1626-SM-4LVMV 16.6
GTEX-PLZ6-1126-SM-3P5ZR 16.1
GTEX-YJ8A-1126-SM-5IFJU 16.1
GTEX-13G51-2326-SM-5LZXV 15.9
GTEX-U4B1-1426-SM-4DXTX 15.9
GTEX-RWSA-2026-SM-47JX8 15.7
GTEX-WFG8-1826-SM-4LVM4 15.6
GTEX-QV31-1026-SM-4R1K3 15.5
GTEX-11TUW-2126-SM-5GU7B 15.4
GTEX-14BMV-2326-SM-5RQJ4 15.4
GTEX-ZTX8-1026-SM-5EGHD 15.4
GTEX-139T6-1526-SM-5P9G6 15.3
GTEX-ZDYS-1226-SM-5IJF3 15.3
GTEX-11TT1-2026-SM-5EQM8 15.0
GTEX-ZZ64-0926-SM-5E44L 15.0
GTEX-X5EB-1826-SM-4E3K8 14.8
GTEX-WH7G-1726-SM-4LVKY 14.5
GTEX-S4Q7-1026-SM-4AD75 14.4
GTEX-OIZH-2026-SM-3NB1M 14.1
GTEX-117YW-1426-SM-5EGGO 14.0
GTEX-ZY6K-1526-SM-5GZXE 13.9
GTEX-11NSD-0826-SM-5986S 13.7
GTEX-XQ3S-2526-SM-4BOOG 13.5
GTEX-111FC-2026-SM-5GZYO 13.4
GTEX-14E6E-1126-SM-5S2R4 13.4
GTEX-Q2AI-1126-SM-48U19 13.4
GTEX-REY6-2126-SM-48FD9 13.4
GTEX-144GM-0826-SM-5O98R 13.2
GTEX-XMK1-1026-SM-4B65H 13.1
GTEX-13FTW-1226-SM-5LZZ1 12.9
GTEX-S33H-1826-SM-4AD65 12.7
GTEX-146FQ-1726-SM-5QGPX 12.6
GTEX-U3ZM-0926-SM-4DXSW 12.6
GTEX-Y8E4-2126-SM-5RQHO 12.6
GTEX-YB5E-1826-SM-5IFI4 12.3
GTEX-SNMC-0926-SM-4DM5U 11.7
GTEX-13FXS-2826-SM-5LZYC 11.2
GTEX-145LT-0626-SM-5O99E 11.0
GTEX-SJXC-2026-SM-4DM6N 11.0
GTEX-XOTO-2826-SM-4B65I 10.2
GTEX-WZTO-0926-SM-4PQZ3 9.3
GTEX-132NY-2826-SM-5P9G2 8.8
GTEX-NFK9-2226-SM-3MJGP 8.4
GTEX-V1D1-1926-SM-4JBGX 7.9
GTEX-ZUA1-2826-SM-59HLE 7.1
Show all

PROSTATE - FANTOM5 CAGE

Average Tags Per Million

84.4

FANTOM5 sample id

Sample description

Tags Per Million

Prostate
Tags Per Million: 84.4
FF:10022-101D4 73,79,93 years, male 84.4

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