We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
GPX3
  • TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:217.9TPM
GTEx:1735.6RPKM
FANTOM5:4516.0Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Glandular cells:Not detected
Myoepithelial cells:Not detected
 

Antibody staining

Antibody CAB069456

 

Adipocytes

Low  

Glandular cells

Not detected  

Myoepithelial cells

Not detected  
 
 
 

BREAST - HPA RNA-seq

Average TPM

217.9

overview Female, age 52
Sample 1
TPM: 190.4
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 524.1
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 42.8
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 114.4
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

1735.6

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 1735.6
Samples: 214

Max RPKM: 8254.1
Min RPKM: 38.7
Std RPKM: 1574.4
Median RPKM: 1284.3
GTEX-YFCO-1826-SM-4W1YH 8254.1
GTEX-ZLFU-2126-SM-4WWEV 7052.7
GTEX-YEC3-1026-SM-5IFI5 6989.5
GTEX-ZT9W-2026-SM-51MRA 6607.2
GTEX-PSDG-1626-SM-48TCQ 6189.4
GTEX-XQ8I-2426-SM-4WAXY 5904.1
GTEX-Y9LG-1426-SM-5IFJZ 5478.1
GTEX-ZA64-1526-SM-5CVMD 5461.9
GTEX-12BJ1-1826-SM-5HL9N 5419.9
GTEX-13O61-1826-SM-5KM4I 5361.7
GTEX-ZZ64-1226-SM-5E43R 5299.3
GTEX-139T6-1626-SM-5PNYZ 5232.8
GTEX-S4Q7-1126-SM-4AD6R 4924.8
GTEX-REY6-2426-SM-48FF5 4807.3
GTEX-11LCK-2426-SM-5HL5F 4409.7
GTEX-11P82-1326-SM-5HL62 4406.7
GTEX-R55D-0826-SM-48FEA 4373.0
GTEX-132AR-0826-SM-5EGK6 4321.9
GTEX-XGQ4-0926-SM-4AT4U 4274.3
GTEX-145ME-1526-SM-5Q5F2 4143.6
GTEX-YB5E-1726-SM-5IFJ3 4091.8
GTEX-XV7Q-2326-SM-4BRVZ 4085.4
GTEX-ZQG8-0726-SM-5P9H9 3920.9
GTEX-Y8E4-1626-SM-5S2MW 3859.9
GTEX-13FTW-1426-SM-5LZWZ 3560.3
GTEX-ZYW4-0826-SM-5GIDG 3546.2
GTEX-1211K-1926-SM-5EQLB 3457.7
GTEX-S4UY-0726-SM-4AD6X 3376.7
GTEX-13FTX-1126-SM-5N9EN 3353.9
GTEX-TKQ1-0226-SM-33HB5 3321.2
GTEX-SE5C-2126-SM-4BRUJ 3320.4
GTEX-13CF3-2126-SM-5IFJP 3276.2
GTEX-11DXZ-1926-SM-5GZZL 3079.6
GTEX-11ZTT-2326-SM-5EQLG 3060.3
GTEX-144GM-0926-SM-5O994 3037.7
GTEX-ZAB4-2526-SM-5HL8M 3030.4
GTEX-14E6E-1326-SM-5S2NR 3029.5
GTEX-ZV6S-1826-SM-5NQ8D 2981.2
GTEX-X261-0626-SM-3NMD9 2843.5
GTEX-145MN-1926-SM-5SIAI 2838.3
GTEX-RUSQ-2026-SM-4GIAK 2832.2
GTEX-ZQUD-1926-SM-51MSA 2782.1
GTEX-XMK1-1126-SM-4IHJ8 2753.4
GTEX-13S86-1226-SM-5S2OA 2747.2
GTEX-13D11-1026-SM-5IJFB 2742.3
GTEX-14753-2426-SM-5LU8U 2688.9
GTEX-12KS4-0126-SM-5Q5A5 2663.8
GTEX-117YX-1426-SM-5H12H 2630.3
GTEX-YB5K-1626-SM-5IFIN 2620.3
GTEX-XUJ4-1926-SM-4BOOV 2608.2
GTEX-UTHO-1026-SM-3GAF7 2561.7
GTEX-ZDTT-2126-SM-5S2OJ 2556.0
GTEX-XUW1-2326-SM-4BOO5 2545.6
GTEX-11NSD-0926-SM-5N9DR 2461.9
GTEX-1399U-1826-SM-5PNZ1 2410.2
GTEX-T6MO-0326-SM-32QOK 2386.5
GTEX-Y114-2026-SM-4TT7L 2386.0
GTEX-11DZ1-0326-SM-5N9BN 2363.7
GTEX-QMRM-1626-SM-4R1KV 2362.2
GTEX-11I78-2226-SM-5PNYA 2313.3
GTEX-146FH-0826-SM-5SI8T 2283.3
GTEX-Y5V6-2126-SM-4WWFX 2244.8
GTEX-1117F-2826-SM-5GZXL 2207.0
GTEX-13W46-0826-SM-5LU3H 2176.4
GTEX-Y3I4-1526-SM-4TT7K 2170.0
GTEX-13113-1726-SM-5GCOO 2167.6
GTEX-WXYG-2226-SM-4E3IM 2144.7
GTEX-13NZ8-0126-SM-5IJCT 2136.6
GTEX-11ONC-2126-SM-5HL6E 2135.5
GTEX-Y5LM-1726-SM-4VDSX 2126.0
GTEX-145MO-0826-SM-5NQBL 2111.2
GTEX-ZWKS-2826-SM-5NQ74 2100.8
GTEX-XYKS-1326-SM-4BRUN 2088.1
GTEX-ZDYS-1126-SM-5K7UB 2005.5
GTEX-U412-1826-SM-4DXTJ 1895.8
GTEX-ZPIC-1126-SM-5BC7F 1893.6
GTEX-S32W-2026-SM-4AD6E 1880.0
GTEX-Y8LW-1626-SM-5IFHX 1877.3
GTEX-12WSK-2226-SM-5GCO5 1861.2
GTEX-U8XE-0826-SM-4E3J1 1856.4
GTEX-133LE-1726-SM-5K7VQ 1797.5
GTEX-11WQK-2426-SM-5GU5C 1792.4
GTEX-1122O-1226-SM-5H113 1782.8
GTEX-X4XY-0926-SM-4E3JD 1753.7
GTEX-11EQ9-1826-SM-5Q5AJ 1713.1
GTEX-R53T-1526-SM-48FEK 1688.0
GTEX-13N1W-0626-SM-5MR4U 1665.4
GTEX-ZAJG-0626-SM-5HL8X 1664.0
GTEX-1192X-2326-SM-5987X 1597.5
GTEX-WI4N-1426-SM-3LK7H 1595.7
GTEX-UJHI-1426-SM-3DB9C 1580.0
GTEX-ZV7C-1826-SM-5NQ83 1558.9
GTEX-ZYWO-2326-SM-5GZY4 1507.9
GTEX-12WSB-0626-SM-59HJO 1490.5
GTEX-12WSN-1326-SM-5GCNT 1488.8
GTEX-ZLV1-1426-SM-4WWES 1488.7
GTEX-11GSO-1926-SM-5A5K3 1484.5
GTEX-WFON-1826-SM-3GILG 1458.5
GTEX-13N11-1726-SM-5J1OJ 1450.7
GTEX-11ZUS-0826-SM-5FQUY 1437.2
GTEX-RWS6-1926-SM-47JXY 1391.3
GTEX-12WSM-1726-SM-5BC6J 1360.9
GTEX-11O72-2126-SM-5N9FO 1326.0
GTEX-QEL4-2126-SM-447AE 1322.5
GTEX-Y5V5-2126-SM-4WWFO 1320.0
GTEX-ZY6K-1626-SM-5GZWV 1304.5
GTEX-13O3Q-2226-SM-5KM4O 1287.6
GTEX-WY7C-2726-SM-3NB3P 1281.0
GTEX-XMD2-0926-SM-4WWEF 1275.3
GTEX-13PVQ-1026-SM-5KM3M 1253.9
GTEX-TML8-1226-SM-32QON 1200.7
GTEX-ZTX8-1226-SM-4YCE9 1195.5
GTEX-TMMY-0726-SM-33HBE 1190.7
GTEX-13W3W-1226-SM-5LU4H 1184.8
GTEX-WOFL-0826-SM-3MJG1 1158.4
GTEX-TKQ2-1826-SM-33HB2 1133.5
GTEX-ZTTD-1026-SM-51MRD 1125.9
GTEX-139TU-0626-SM-5KM3X 1100.2
GTEX-XMD1-0826-SM-4AT52 1088.1
GTEX-WYJK-1326-SM-3NB2T 1080.7
GTEX-T2YK-2226-SM-32QPT 1073.7
GTEX-QVJO-1826-SM-447C9 1056.2
GTEX-VJWN-0726-SM-3GIJ8 1027.2
GTEX-X4EP-2926-SM-3P5YQ 1018.8
GTEX-ZVT4-1026-SM-57WC4 1011.0
GTEX-145LT-0726-SM-5S2VM 971.5
GTEX-Y3IK-2326-SM-4WWDT 970.6
GTEX-14AS3-1626-SM-5S2OY 964.9
GTEX-UPK5-2326-SM-3P5Z8 953.3
GTEX-132Q8-1426-SM-5EGK7 948.9
GTEX-ZF3C-2326-SM-5S2MZ 911.4
GTEX-ZYT6-0126-SM-5E45J 903.6
GTEX-11DXY-2326-SM-5GICW 865.8
GTEX-13OW8-0226-SM-5K7UP 862.5
GTEX-S4P3-1326-SM-4AD6V 857.8
GTEX-111YS-1926-SM-5GICC 840.1
GTEX-ZZPU-0626-SM-5E43T 837.8
GTEX-U3ZN-1926-SM-4DXSG 831.4
GTEX-13FHO-0826-SM-5L3E8 757.9
GTEX-11TUW-1826-SM-5BC5D 718.3
GTEX-132NY-0826-SM-5K7Y7 711.1
GTEX-ZVT2-1826-SM-5NQ8W 705.1
GTEX-117XS-1926-SM-5GICO 703.1
GTEX-ZF29-1926-SM-5S2P1 701.7
GTEX-XQ3S-1326-SM-4BOPQ 697.8
GTEX-QEG5-0726-SM-4R1JQ 696.4
GTEX-S33H-0326-SM-4AD6N 696.3
GTEX-11TT1-2126-SM-5GU5Y 686.9
GTEX-11P81-1926-SM-5BC53 682.3
GTEX-1314G-1226-SM-5BC6D 666.4
GTEX-S341-1526-SM-4AD6K 637.2
GTEX-XBED-1626-SM-47JYN 630.2
GTEX-ZEX8-2226-SM-57WC6 627.2
GTEX-13NZB-2126-SM-5MR4Y 607.5
GTEX-11P7K-0726-SM-5EGKX 592.3
GTEX-X15G-1626-SM-3NMB3 585.9
GTEX-13O3O-0826-SM-5K7WE 581.5
GTEX-S7SE-0826-SM-4AT4D 549.2
GTEX-ZVZQ-0826-SM-51MRF 516.1
GTEX-147F4-2826-SM-5NQBN 512.5
GTEX-11EMC-2026-SM-5A5JV 506.6
GTEX-11EI6-0626-SM-5985T 490.5
GTEX-ZVE2-1226-SM-5NQ8R 482.2
GTEX-13NZ9-1026-SM-5MR5K 474.7
GTEX-11OF3-1926-SM-59889 463.7
GTEX-11EM3-1326-SM-5N9C6 462.9
GTEX-QDT8-0626-SM-48TYW 452.0
GTEX-13OW5-2226-SM-5L3HC 449.4
GTEX-ZDXO-0126-SM-5S2ND 435.5
GTEX-WRHU-0326-SM-3MJFY 434.2
GTEX-1269C-2426-SM-5FQSN 432.7
GTEX-VUSG-2226-SM-4KKZO 417.3
GTEX-T5JW-2026-SM-4DM63 385.6
GTEX-ZUA1-1526-SM-59HLS 382.0
GTEX-144GL-2026-SM-5LU3O 373.0
GTEX-R55F-1726-SM-2TF4R 359.5
GTEX-ZVTK-0326-SM-51MRR 353.3
GTEX-11NV4-2026-SM-5N9DG 351.5
GTEX-W5X1-2326-SM-3GIL6 337.2
GTEX-11WQC-1726-SM-5GU4W 326.5
GTEX-ZXES-0826-SM-5E43C 317.5
GTEX-RU72-0626-SM-46MUI 317.2
GTEX-1313W-0826-SM-5EQ4T 316.0
GTEX-13QIC-2326-SM-5LU5N 314.4
GTEX-ZYFC-0826-SM-5E44K 290.0
GTEX-WYBS-0926-SM-3NM94 278.2
GTEX-ZU9S-1926-SM-5NQBP 275.2
GTEX-Q2AG-0326-SM-48U1O 269.4
GTEX-139T8-0826-SM-5L3DE 268.1
GTEX-U3ZH-1426-SM-4DXSR 264.0
GTEX-13O3P-0826-SM-5L3DH 263.6
GTEX-R3RS-0626-SM-48FE1 263.5
GTEX-YJ8O-2226-SM-5IFHW 252.6
GTEX-131YS-0626-SM-5EGKL 219.3
GTEX-Y111-2026-SM-4SOJA 209.4
GTEX-13PL6-2926-SM-5L3I2 190.0
GTEX-SIU7-1626-SM-4BRUK 186.0
GTEX-T2IS-1526-SM-32QPR 181.4
GTEX-WYVS-1726-SM-3NMAY 180.7
GTEX-12ZZX-1126-SM-5EGKB 180.0
GTEX-XOT4-0726-SM-4GIAW 168.6
GTEX-11GS4-2126-SM-5A5KR 144.9
GTEX-13CF2-2026-SM-5K7VI 136.3
GTEX-14ABY-2126-SM-5QGQZ 125.7
GTEX-ZC5H-2626-SM-5J2MG 120.5
GTEX-11DXW-0626-SM-5N9ER 120.3
GTEX-ZF2S-2026-SM-5E461 118.3
GTEX-XUZC-1626-SM-4BRVP 117.0
GTEX-11PRG-0826-SM-5EQ6A 104.5
GTEX-T6MN-0726-SM-32PML 104.2
GTEX-T5JC-2126-SM-32PMO 102.7
GTEX-13FTY-2226-SM-5J1ND 58.3
GTEX-131XW-0726-SM-5EGK3 44.2
GTEX-YFC4-1426-SM-5IFJG 38.7
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

4516.0

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 4516.0
FF:10080-102A8 77 years, female 4516.0

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.