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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:100.6TPM
GTEx:368.1RPKM
FANTOM5:309.2Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Low
 

Antibody staining

Antibody CAB069456

 

Glandular cells

Low  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

100.6

overview Male, age 65
Sample 1
TPM: 84.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 94.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 125.4
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 98.1

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

368.1

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 368.1
Samples: 88

Max RPKM: 1577.2
Min RPKM: 83.7
Std RPKM: 273.5
Median RPKM: 292.6
GTEX-13OVI-1926-SM-5IJCG 1577.2
GTEX-111CU-1326-SM-5NQ8L 1472.9
GTEX-Y5LM-1626-SM-4VDTB 1334.2
GTEX-148VJ-2226-SM-5NQ9M 804.6
GTEX-1192X-2526-SM-59868 796.2
GTEX-WFG8-1626-SM-4LVMB 772.2
GTEX-13QBU-1926-SM-5IJEW 760.3
GTEX-117YX-0326-SM-5GICL 747.5
GTEX-13111-1426-SM-5DUW3 737.7
GTEX-13O21-1026-SM-5IJDU 677.9
GTEX-ZQUD-0926-SM-57WE3 599.7
GTEX-12BJ1-1926-SM-5HL9Z 581.5
GTEX-Y114-1426-SM-4TT6W 565.8
GTEX-139T6-1026-SM-5IJGC 554.3
GTEX-XMK1-1826-SM-4B66F 534.2
GTEX-12WSK-1526-SM-5CVNO 522.5
GTEX-ZPIC-2326-SM-57WDW 520.9
GTEX-ZVT2-2126-SM-5NQ93 519.9
GTEX-13RTK-0826-SM-5Q5C6 502.6
GTEX-WH7G-1626-SM-4LVMY 496.8
GTEX-WRHK-1026-SM-4MVOD 490.6
GTEX-ZP4G-1626-SM-57WGD 489.7
GTEX-ZQG8-2526-SM-57WEQ 460.6
GTEX-13O61-1326-SM-5KM31 460.3
GTEX-WFG7-1726-SM-4LVME 455.5
GTEX-1399U-2126-SM-5IFEZ 442.4
GTEX-ZTPG-2626-SM-57WFX 438.4
GTEX-WEY5-1526-SM-4LMJF 427.9
GTEX-131XG-1726-SM-5LZUR 382.0
GTEX-XAJ8-0526-SM-47JYK 380.2
GTEX-145ME-0926-SM-5O9AR 356.4
GTEX-13113-1226-SM-5EGHT 348.8
GTEX-ZTSS-0926-SM-59865 341.0
GTEX-XUZC-1426-SM-4BRV3 338.1
GTEX-14DAR-1426-SM-5RQIR 330.9
GTEX-131XF-1326-SM-5GCMQ 316.0
GTEX-Y3IK-1726-SM-4YCCR 314.8
GTEX-XBED-1426-SM-4AT4G 311.1
GTEX-11VI4-1626-SM-5EQKO 310.6
GTEX-ZLV1-1126-SM-4WWBW 303.3
GTEX-YEC4-1726-SM-4W21E 295.6
GTEX-WQUQ-2426-SM-4MVNW 293.7
GTEX-Z9EW-0926-SM-5CVMM 293.1
GTEX-13FH7-1226-SM-5IJFK 292.9
GTEX-WFJO-0926-SM-4LVM2 292.3
GTEX-ZF2S-1726-SM-57WFT 278.7
GTEX-11XUK-1426-SM-5EQMG 267.0
GTEX-ZVP2-1726-SM-5GU5P 263.2
GTEX-ZLFU-1526-SM-4WWBT 257.1
GTEX-11I78-1126-SM-5A5K5 251.6
GTEX-YF7O-1826-SM-5IFIU 251.4
GTEX-ZXES-1526-SM-5NQ95 243.9
GTEX-ZVZP-1826-SM-5GZXB 243.3
GTEX-XXEK-1026-SM-4BRUW 242.6
GTEX-13CF3-1226-SM-5LZXN 241.7
GTEX-13PL7-2626-SM-5IFH4 235.8
GTEX-11DXX-1626-SM-5H11H 230.8
GTEX-11P7K-1626-SM-5GU63 225.9
GTEX-ZZ64-0526-SM-5GZXM 220.4
GTEX-11EQ9-1326-SM-5985X 215.3
GTEX-11P82-0826-SM-5P9GU 209.0
GTEX-XGQ4-1326-SM-4GIDU 204.8
GTEX-13FTW-2026-SM-5IJE2 202.6
GTEX-145LT-1026-SM-5LU9O 198.3
GTEX-ZA64-1226-SM-5HL7B 197.8
GTEX-X15G-1426-SM-4PQZK 193.9
GTEX-ZPCL-1726-SM-57WEO 191.1
GTEX-1399S-2026-SM-5KM4B 187.0
GTEX-139YR-2226-SM-5IFFW 186.0
GTEX-VUSG-1726-SM-4KKZL 184.5
GTEX-ZYFG-2026-SM-5E43Y 180.7
GTEX-YB5E-1526-SM-5IFIE 177.8
GTEX-ZYWO-1526-SM-5SIAL 176.9
GTEX-X5EB-1626-SM-4E3IV 173.9
GTEX-13D11-0726-SM-5LZZB 169.2
GTEX-ZTX8-0526-SM-59HLD 168.7
GTEX-11NSD-1726-SM-5N9C3 162.5
GTEX-1122O-1326-SM-5H11F 150.3
GTEX-14E6E-1626-SM-5RQI7 146.9
GTEX-ZC5H-2326-SM-4WAYT 138.7
GTEX-11DXZ-1326-SM-5H11X 132.1
GTEX-Y9LG-1626-SM-5IFHM 121.4
GTEX-VJYA-0926-SM-4KL1N 114.5
GTEX-ZEX8-1826-SM-57WBH 111.3
GTEX-UPK5-2026-SM-4JBIM 110.3
GTEX-1399R-2026-SM-5K7WN 104.0
GTEX-133LE-1426-SM-5IFH1 103.0
GTEX-111YS-1426-SM-5GID8 83.7
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

309.2

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 309.2
FF:10024-101D6 15,40,85 years, mixed 309.2

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The Human Protein Atlas project is funded
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