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Term
Gene name

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External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

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Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

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SYNJ2BP
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TISSUE ATLAS PRIMARY DATA TESTIS
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Testis

Tissue proteome

Testis

TESTIS - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:7.2TPM
GTEx:16.7RPKM
FANTOM5:90.6Tags Per Million

TESTIS - Annotated protein expression

Annotated protein
expression

Cells in seminiferous ducts:Medium
Leydig cells:Low
 

Antibody staining

Antibody HPA000866

 

Cells in seminiferous ducts

Medium  

Leydig cells

Low  
 
 
 

TESTIS - HPA RNA-seq

Average TPM

7.2

overview Male, age 56
Sample 1
TPM: 8.9
Cell types%
Cells in seminiferous ducts: 65
Other cell types: 35
overview Male, age 34
Sample 2
TPM: 7.3
Cell types%
Cells in seminiferous ducts: 75
Other cell types: 25
overview Male, age 62
Sample 3
TPM: 7.1
Cell types%
Cells in seminiferous ducts: 70
Other cell types: 30
overview Male, age 34
Sample 4
TPM: 9.0
Cell types%
Cells in seminiferous ducts: 60
Other cell types: 40
overview Male, age 26
Sample 5
TPM: 6.2
Cell types%
Cells in seminiferous ducts: 55
Other cell types: 45
overview Male, age 50
Sample 6
TPM: 5.4
Cell types%
Cells in seminiferous ducts: 85
Other cell types: 15
overview Male, age 37
Sample 7
TPM: 6.4
Cell types%
Cells in seminiferous ducts: 35
Other cell types: 65
overview Male, age 51
Sample 8
TPM: 7.0
Cell types%
Cells in seminiferous ducts: 65
Other cell types: 35
overview Male, age 34
Sample 9
TPM: 7.1
Cell types%
Cells in seminiferous ducts: 70
Other cell types: 30
overview Male, age 26
Sample 10
TPM: 7.2
Cell types%
Cells in seminiferous ducts: 75
Other cell types: 25

TESTIS - GTEx RNA-seq

Average RPKM

16.7

GTEx sample id

RPKM

 

Testis

Testis
RPKM: 16.7
Samples: 172

Max RPKM: 27.4
Min RPKM: 5.6
Std RPKM: 4.3
Median RPKM: 16.8
GTEX-11WQC-2326-SM-5EQKE 27.4
GTEX-11NV4-1726-SM-5N9FC 27.1
GTEX-13OVL-0426-SM-5IFG6 26.0
GTEX-11ZUS-2726-SM-5FQUA 25.9
GTEX-13112-0226-SM-5P9IV 25.8
GTEX-13VXU-0726-SM-5J2O7 25.5
GTEX-13FHP-2826-SM-5IJFW 25.2
GTEX-WK11-0326-SM-4OOS6 24.6
GTEX-ZAB5-2426-SM-5CVMW 24.5
GTEX-R55E-0726-SM-48FCZ 24.1
GTEX-111VG-1926-SM-5GIDO 24.0
GTEX-Z93S-1726-SM-5HL8G 24.0
GTEX-ZYT6-2726-SM-5GICP 23.8
GTEX-11EQ8-1426-SM-5EGJR 23.7
GTEX-13N1W-2626-SM-5IJEP 23.2
GTEX-144GM-0426-SM-5Q5C8 23.1
GTEX-ZVTK-0126-SM-57WDG 22.9
GTEX-XQ3S-2726-SM-4BOP2 22.3
GTEX-139TS-1726-SM-5IJG5 22.2
GTEX-13FLW-2126-SM-5N9FD 22.0
GTEX-145MO-0126-SM-5S2QU 21.8
GTEX-11OF3-1826-SM-5987N 21.7
GTEX-139TT-2226-SM-5LZWO 21.7
GTEX-QEG4-0126-SM-48TZE 21.5
GTEX-12ZZY-0126-SM-5LZV2 21.3
GTEX-117YW-1526-SM-5EGGP 21.2
GTEX-131XE-0426-SM-5IJF4 21.2
GTEX-14ABY-0626-SM-5Q5C9 21.0
GTEX-XLM4-1526-SM-4AT6D 20.9
GTEX-11NUK-2626-SM-5A5MB 20.5
GTEX-12WSH-0326-SM-5GCNH 20.5
GTEX-117XS-2026-SM-5GID1 20.4
GTEX-V1D1-2126-SM-4JBH4 20.2
GTEX-11GS4-2026-SM-5N9CP 20.1
GTEX-Y111-2426-SM-4TT23 19.9
GTEX-12WSL-2326-SM-5DUXQ 19.8
GTEX-REY6-0126-SM-48FDT 19.8
GTEX-ZTSS-1526-SM-51MTC 19.8
GTEX-UPJH-0126-SM-4IHLL 19.7
GTEX-XBEC-0126-SM-4GIDT 19.5
GTEX-N7MS-0126-SM-3TW8O 19.4
GTEX-1212Z-0326-SM-5FQSJ 19.3
GTEX-T6MN-2026-SM-4DM7L 19.3
GTEX-YF7O-2026-SM-4W1YE 19.3
GTEX-11DXZ-2126-SM-59881 19.2
GTEX-11LCK-2326-SM-5HL53 19.2
GTEX-YEC4-1526-SM-4W1YU 19.2
GTEX-PW2O-1426-SM-48TCD 19.1
GTEX-13OW5-2526-SM-5L3I1 18.9
GTEX-S7PM-0626-SM-4AD4Q 18.9
GTEX-WZTO-0326-SM-4PQYZ 18.8
GTEX-ZT9W-2226-SM-57WFU 18.8
GTEX-QV31-1126-SM-4R1K4 18.7
GTEX-ZQUD-2026-SM-51MSM 18.6
GTEX-YEC3-1726-SM-5IFIK 18.5
GTEX-11O72-0726-SM-5P9GO 18.4
GTEX-QLQW-1026-SM-447A9 18.4
GTEX-SNOS-1126-SM-4DM67 18.3
GTEX-U8T8-1126-SM-4DXUE 18.3
GTEX-ZT9X-1426-SM-5DUX1 18.2
GTEX-ZV7C-2026-SM-5NQ8F 18.1
GTEX-ZYFC-0126-SM-5GIEH 18.1
GTEX-14753-0626-SM-5Q5CY 18.0
GTEX-13O1R-0726-SM-5IJEI 17.9
GTEX-OIZH-2126-SM-3NB1P 17.9
GTEX-T8EM-0126-SM-4DM5R 17.9
GTEX-144GL-0726-SM-5LU4P 17.7
GTEX-S95S-1126-SM-4B64E 17.7
GTEX-ZPU1-2126-SM-57WED 17.7
GTEX-11EI6-2226-SM-5EGJM 17.5
GTEX-11EQ9-1926-SM-5PNVV 17.5
GTEX-12WSI-2126-SM-5GCMV 17.5
GTEX-13NZB-2026-SM-5MR4M 17.5
GTEX-OOBK-2126-SM-3LK5T 17.5
GTEX-11NSD-1026-SM-5N9BE 17.4
GTEX-13NZA-2526-SM-5IJFX 17.3
GTEX-OXRL-2126-SM-3NM98 17.3
GTEX-147JS-0126-SM-5S2TW 17.2
GTEX-YFCO-1726-SM-4W21S 17.2
GTEX-12C56-1426-SM-5FQSW 17.1
GTEX-132QS-1226-SM-5P9GD 17.1
GTEX-145MH-2326-SM-5O9AW 17.1
GTEX-WVLH-2626-SM-4MVNV 17.0
GTEX-X5EB-2026-SM-4E3KA 16.9
GTEX-XGQ4-2026-SM-4AT6G 16.9
GTEX-QEG5-0126-SM-4R1JR 16.8
GTEX-S4Q7-1226-SM-4AD5I 16.8
GTEX-TKQ1-0926-SM-4DXU2 16.8
GTEX-X261-2326-SM-4PQYU 16.8
GTEX-13N2G-0126-SM-5N9DV 16.7
GTEX-TKQ2-1526-SM-4DXUN 16.7
GTEX-ZVZP-2226-SM-57WBF 16.6
GTEX-ZA64-1626-SM-5CVME 16.4
GTEX-V955-1926-SM-4KL1L 16.3
GTEX-X3Y1-2626-SM-4PQZI 16.3
GTEX-S7SE-0326-SM-4AT5Q 16.2
GTEX-U8XE-0126-SM-4E3I3 16.2
GTEX-111FC-1926-SM-5GZYC 16.0
GTEX-U4B1-1526-SM-4DXSL 15.8
GTEX-Q2AI-1226-SM-48U14 15.7
GTEX-ZZ64-1126-SM-5GZXY 15.7
GTEX-139T6-1226-SM-5IFFC 15.6
GTEX-13NYB-2226-SM-5MR58 15.4
GTEX-U3ZM-1626-SM-4DXSK 15.4
GTEX-ZDYS-1326-SM-5IJFF 15.4
GTEX-RN64-2326-SM-48FDW 15.3
GTEX-SNMC-1026-SM-4DM7K 15.3
GTEX-WHSB-2126-SM-4M1XF 15.3
GTEX-12696-0226-SM-5EGL3 15.2
GTEX-13O21-1226-SM-5J2MK 15.2
GTEX-WH7G-1926-SM-4LVMM 15.2
GTEX-111YS-2026-SM-5EGGL 15.1
GTEX-13O61-2026-SM-5J2M6 15.1
GTEX-RWSA-2426-SM-47JXR 15.1
GTEX-13OVH-0726-SM-5N9BU 15.0
GTEX-SUCS-1326-SM-4DM5T 15.0
GTEX-XMK1-2026-SM-4B65K 15.0
GTEX-111CU-1726-SM-5EGHM 14.8
GTEX-OOBJ-2126-SM-3NB1N 14.8
GTEX-YJ89-0626-SM-4TT3Z 14.8
GTEX-11TUW-2226-SM-5EQL9 14.6
GTEX-OHPM-2126-SM-3LK75 14.6
GTEX-S33H-0126-SM-4AD62 14.5
GTEX-S3XE-1526-SM-4AD5A 14.5
GTEX-ZTX8-1126-SM-51MRM 14.5
GTEX-P4QS-2126-SM-3NMCF 14.4
GTEX-P4QR-0226-SM-3NMCH 14.3
GTEX-T5JC-0726-SM-4DM55 14.3
GTEX-14A6H-2326-SM-5Q5B5 14.2
GTEX-Q2AH-1526-SM-48TZG 14.2
GTEX-RM2N-1326-SM-48FCW 14.1
GTEX-WFG8-1926-SM-4LVM1 14.0
GTEX-Y5V6-1726-SM-4VDSZ 14.0
GTEX-XAJ8-1326-SM-47JYT 13.9
GTEX-144GN-1626-SM-5Q5BU 13.8
GTEX-RUSQ-2126-SM-47JXK 13.8
GTEX-11P82-1526-SM-5BC5M 13.7
GTEX-13111-1526-SM-5EGJX 13.7
GTEX-12WSM-1326-SM-5GCP9 13.5
GTEX-QMRM-1526-SM-4R1K6 13.5
GTEX-WOFM-1126-SM-4OOSB 13.4
GTEX-R55D-0126-SM-48FEL 13.2
GTEX-R55C-1426-SM-48FED 12.7
GTEX-13OW6-0126-SM-5IJGM 12.5
GTEX-QV44-1726-SM-4R1KG 12.5
GTEX-O5YT-2126-SM-3MJGD 12.2
GTEX-1399R-1626-SM-5P9GG 11.9
GTEX-11P7K-1026-SM-5HL6Y 11.7
GTEX-NFK9-0126-SM-3LK5H 11.7
GTEX-XBED-2026-SM-4AT5D 11.7
GTEX-U3ZH-1526-SM-4DXV1 11.6
GTEX-VJYA-1426-SM-4KL1Y 11.5
GTEX-11TT1-2226-SM-5GU6B 11.2
GTEX-145LT-0426-SM-5LUAP 11.1
GTEX-ZUA1-2726-SM-59HLJ 11.0
GTEX-1399Q-2826-SM-5IJEZ 10.9
GTEX-YB5E-1926-SM-5IFIG 10.4
GTEX-QLQ7-1426-SM-4R1JX 10.3
GTEX-OIZI-0126-SM-3NB13 9.9
GTEX-11ONC-2226-SM-5HL6D 9.8
GTEX-1339X-1926-SM-5PNVP 9.7
GTEX-ZAB4-0126-SM-5CVMG 9.5
GTEX-PLZ5-1526-SM-3P5ZX 9.2
GTEX-XPT6-1626-SM-4B655 9.1
GTEX-ZDTT-2026-SM-5K7TY 8.4
GTEX-Y8E4-2226-SM-5LU94 8.3
GTEX-13FTW-1326-SM-5LZZD 8.1
GTEX-147F4-0626-SM-5LUAK 7.6
GTEX-Y9LG-1726-SM-4VBQE 6.9
GTEX-WFON-2026-SM-4LVMW 6.8
GTEX-11WQK-2826-SM-5EQKH 6.2
GTEX-XPVG-2226-SM-4B65U 5.6
Show all

TESTIS - FANTOM5 CAGE

Average Tags Per Million

90.6

FANTOM5 sample id

Sample description

Tags Per Million

Testis
Tags Per Million: 90.6
FF:10026-101D8 34,53,86 years, male 99.2
FF:10096-102C6 14-64 years, male 82.0

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