Fields »
ABOUT
HELP
BLOG
GALT

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:6.6TPM
GTEx:13.2RPKM
FANTOM5:11.6Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Chondrocytes:Medium
Fibroblasts:Low
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA004868

  

Antibody HPA005729

  

Adipocytes

 Not detected   Medium  

Chondrocytes

 High   Medium  

Fibroblasts

 Low   Low  

Peripheral nerve

 Not detected  
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Medium
 
 

Antibody staining

Antibody HPA004868

  

Antibody HPA005729

  

Adipocytes

 Low   Medium  

Fibroblasts

 Not detected   Medium  

Peripheral nerve

 Not detected   Medium  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

6.6
N/A Female, age 80
Sample 1
TPM: 7.7
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 5.4
N/A Female, age 57
Sample 3
TPM: 6.5
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 5.0
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 8.4
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

13.2

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 12.4
Samples: 350

Max RPKM: 22.5
Min RPKM: 2.7
Std RPKM: 3.5
Median RPKM: 12.2
GTEX-WVJS-0226-SM-4MVOU 22.5
GTEX-11ZVC-2626-SM-5FQTA 22.3
GTEX-X638-0226-SM-47JZ9 22.0
GTEX-13G51-2626-SM-5LZYW 21.4
GTEX-145MF-0526-SM-5LUA6 20.5
GTEX-11OF3-2426-SM-5Q5AS 20.4
GTEX-YJ8O-2426-SM-5HL7S 20.3
GTEX-QV44-1825-SM-447CF 20.0
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 14.5
Samples: 227

Max RPKM: 34.9
Min RPKM: 4.2
Std RPKM: 5.9
Median RPKM: 13.3
GTEX-14A6H-1026-SM-5SIAZ 34.9
GTEX-131YS-1726-SM-5HL7G 28.9
GTEX-ZYT6-2126-SM-5GZZ4 28.5
GTEX-11NUK-2026-SM-5PNVZ 28.0
GTEX-132NY-1126-SM-5PNVE 27.5
GTEX-14DAQ-2526-SM-5RQIO 27.5
GTEX-13NZ9-2026-SM-5KM1U 27.3
GTEX-13S7M-0826-SM-5QGQX 26.4
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

11.6

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 11.6
FF:10010-101C1 65,65,76 years, mixed 11.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.