Tissue expression of BBIP1 - Summary - The Human Protein Atlas

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BBIP1

TISSUE

CELL

CANCER

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation

Dictionary


Tissue proteome

GENERAL INFORMATION
Gene name	BBIP1
Gene description	BBSome interacting protein 1
Protein class	Disease related genes Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	6
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Expressed in all
GTEx:	Tissue enriched (testis)
FANTOM5:	Expressed in all

Protein evidence

Evidence at protein level

Protein expression

Cytoplasmic expression in selected tissues.

DATA RELIABILITY
Data reliability description	Antibody staining mainly not consistent with RNA expression data. Pending external verification.
Reliability score	Uncertain based on 1 antibody. HPA055206
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

Cerebral cortex

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

Thyroid gland

Parathyroid gland

Adrenal gland

Bone marrow & immune system

Appendix

Bone marrow

Lymph node

Tonsil

Spleen

Muscle tissues

Heart muscle

Skeletal muscle

Smooth muscle

Lung

Nasopharynx

N/A

Bronchus

N/A

Lung

Liver & gallbladder

Liver

Gallbladder

Pancreas

Pancreas

Gastrointestinal tract

Oral mucosa

N/A

Salivary gland

Esophagus

Stomach

Duodenum

Small intestine

Colon

Rectum

Kidney & urinary bladder

Kidney

Urinary bladder

Male tissues

Testis

Epididymis

Prostate

Seminal vesicle

Female tissues

Breast

Vagina

N/A

Cervix, uterine

Endometrium

Fallopian tube

Ovary

Placenta

Adipose & soft tissue

Adipose tissue

Soft tissue

N/A

Skin

Skin

Cerebral cortex

PROTEIN EXPRESSION OVERVIEW
Organ Expression Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
GTEx dataset Organ Expression Alphabetical RNA tissue category: Tissue enriched (testis)
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Expressed in all

GENE INFORMATION
Gene name	BBIP1 (HGNC Symbol)
Synonyms	bA348N5.3, BBIP10, BBS18, NCRNA00081
Description	BBSome interacting protein 1 (HGNC Symbol)
Entrez gene summary	This gene encodes one of eight proteins that form the BBSome complex and is essential for its assembly. The BBSome complex is involved in trafficking signal receptors to and from the cilia. Mutations in this gene result in Bardet-Biedl syndrome 18. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Oct 2014]
Chromosome	10
Cytoband	q25.2
Chromosome location (bp)	110898730 - 110919274
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000214413 (version 83.38)
Entrez gene	92482
UniProt	A8MTZ0 (UniProt - Evidence at protein level)
neXtProt	NX_A8MTZ0
Antibodypedia	BBIP1 antibodies

PROTEIN BROWSER

BBIP1-001	BBIP1-003	BBIP1-004	BBIP1-007	BBIP1-008	BBIP1-010

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
BBIP1-001 ENSP00000436622 ENST00000448814	A8MTZ0 [Direct mapping] BBSome-interacting protein 1 Show all	Predicted intracellular proteins Disease related genes Show all	GO:0005515 [protein binding] GO:0005737 [cytoplasm] GO:0005829 [cytosol] GO:0005929 [cilium] GO:0006996 [organelle organization] GO:0015031 [protein transport] GO:0034464 [BBSome] GO:0042384 [cilium assembly] Show all	92 aa 10.5 kDa	No	0
BBIP1-003 ENSP00000432849 ENST00000447005	A8MTZ0 [Direct mapping] BBSome-interacting protein 1 Show all	Predicted intracellular proteins Disease related genes Show all	GO:0005515 [protein binding] GO:0005737 [cytoplasm] GO:0005829 [cytosol] GO:0005929 [cilium] GO:0006996 [organelle organization] GO:0015031 [protein transport] GO:0034464 [BBSome] GO:0042384 [cilium assembly] Show all	70 aa 8.2 kDa	No	0
BBIP1-004 ENSP00000433157 ENST00000454061	A8MTZ0 [Direct mapping] BBSome-interacting protein 1 Show all	Predicted intracellular proteins Disease related genes Show all	GO:0005515 [protein binding] GO:0005737 [cytoplasm] GO:0005829 [cytosol] GO:0005929 [cilium] GO:0006996 [organelle organization] GO:0015031 [protein transport] GO:0034464 [BBSome] GO:0042384 [cilium assembly] Show all	103 aa 11.5 kDa	No	0
BBIP1-007 ENSP00000432274 ENST00000423273	A8MTZ0 [Direct mapping] BBSome-interacting protein 1 Show all	Predicted intracellular proteins Disease related genes Show all	GO:0005515 [protein binding] GO:0005737 [cytoplasm] GO:0005829 [cytosol] GO:0005929 [cilium] GO:0006996 [organelle organization] GO:0015031 [protein transport] GO:0034464 [BBSome] GO:0042384 [cilium assembly] Show all	67 aa 7.7 kDa	No	0
BBIP1-008 ENSP00000431936 ENST00000436562	A8MTZ0 [Direct mapping] BBSome-interacting protein 1 Show all	Predicted intracellular proteins Disease related genes Show all	GO:0005515 [protein binding] GO:0005737 [cytoplasm] GO:0005829 [cytosol] GO:0005929 [cilium] GO:0006996 [organelle organization] GO:0015031 [protein transport] GO:0034464 [BBSome] GO:0042384 [cilium assembly] Show all	70 aa 8.2 kDa	No	0
BBIP1-010 ENSP00000474675 ENST00000605742	A8MTZ0 [Direct mapping] BBSome-interacting protein 1 Show all	Predicted intracellular proteins Disease related genes Show all	GO:0005515 [protein binding] GO:0005737 [cytoplasm] GO:0005829 [cytosol] GO:0005929 [cilium] GO:0006996 [organelle organization] GO:0015031 [protein transport] GO:0034464 [BBSome] GO:0042384 [cilium assembly] Show all	92 aa 10.5 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.