Tissue expression of C1GALT1C1L - Staining in colon

COLON - Expression summary

RNA expression

HPA:	0.9	TPM
GTEx:	1.2	RPKM
FANTOM5:	1.4	Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM	0.9

Male, age 54

Sample 1
TPM: 0.2

Cell types%

Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25

Female, age 57

Sample 2
TPM: 0.5

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 80

Sample 3
TPM: 0.3

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 68

Sample 4
TPM: 0.3

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 68

Sample 5
TPM: 0.1

Cell types%

Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70

Female, age 61

Sample 6
TPM: 3.3

Cell types%

Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30

Male, age 80

Sample 7
TPM: 0.8

Cell types%

Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

Female, age 78

Sample 8
TPM: 0.1

Cell types%

Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50

Male, age 84

Sample 9
TPM: 2.3

Cell types%

Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35

Male, age 80

Sample 10
TPM: 0.7

Cell types%

Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45

Female, age 78

Sample 11
TPM: 0.5

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 69

Sample 12
TPM: 1.3

Cell types%

Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45

Female, age 72

Sample 13
TPM: 0.9

Cell types%

Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM	1.2

GTEx sample id

RPKM

Colon - Sigmoid

Colon - Sigmoid
RPKM: 1.6

Samples: 149

Max RPKM: 3.6
Min RPKM: 0.4
Std RPKM: 0.7
Median RPKM: 1.5

GTEX-WFG8-1726-SM-4LVM6

3.6

GTEX-ZP4G-1526-SM-57WE5

3.6

GTEX-13OVI-2126-SM-5KM3U

3.3

GTEX-14E6E-1726-SM-5S2R6

3.3

GTEX-ZXES-1726-SM-5E43G

3.3

GTEX-11P7K-1826-SM-5HL5A

3.2

GTEX-13111-1926-SM-5GCOL

3.2

GTEX-111CU-1226-SM-5EGIN

3.1

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Colon - Transverse

Colon - Transverse
RPKM: 0.9

Samples: 196

Max RPKM: 3.9
Min RPKM: 0
Std RPKM: 0.8
Median RPKM: 0.6

GTEX-WEY5-1426-SM-4LMJ3

3.9

GTEX-U3ZH-1326-SM-4DXSF

3.0

GTEX-YEC4-1926-SM-5IFHJ

3.0

GTEX-ZYFG-1926-SM-5GID5

3.0

GTEX-111YS-1626-SM-5GZZ9

2.8

GTEX-OXRL-1426-SM-3NM9E

2.8

GTEX-SNMC-1126-SM-4DM5M

2.8

GTEX-13FH7-1526-SM-5J2N6

2.7

Show all

COLON - FANTOM5 CAGE

Average Tags Per Million	1.4

FANTOM5 sample id

Sample description

Tags Per Million

Colon
Tags Per Million: 1.4

FF:10014-101C5

62,83,84 years, mixed

1.4