Cell atlas - PRAC2 - The Human Protein Atlas

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PRAC2

TISSUE

CELL

CANCER

CELL ATLAS RNA EXPRESSION

GENE/PROTEIN

Dictionary

Human cell

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GENERAL INFORMATION
Gene name	PRAC2
Gene description	Prostate cancer susceptibility candidate 2
Protein class	Predicted membrane proteins Predicted secreted proteins
Predicted localization	Membrane,Secreted
Number of transcripts	2
	SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION
Summary
RNA cell category	Group enriched (PC-3, REH)
Protein evidence	Evidence at transcript level
Main location	Not available

DATA RELIABILITY
Reliability score	Pending cell analysis.

ASSAYS

RNA EXPRESSION OVERVIEW
RNA cell line category: Group enriched (PC-3, REH) Organ Origin Category Expression Alphabetical Cell lines sorted after organ of phenotypic resemblance. Cell lines sorted after biological source for establishment. Cell lines sorted after the cell line category according to Cellosaurus. Cell lines sorted on descending RNA expression. Cell lines sorted alphabetically.

GENE INFORMATION
Gene name	PRAC2 (HGNC Symbol)
Synonyms	C17orf93, HOXB-AS5, HOXB13-AS1, NCRNA00253
Description	Prostate cancer susceptibility candidate 2 (HGNC Symbol)
Entrez gene summary	This gene is highly expressed in prostate, rectum, colon, and testis. This gene may produce a non-coding RNA or may encode a short protein that might localize to the nucleus. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Aug 2013]
Chromosome	17
Cytoband	q21.32
Chromosome location (bp)	48723168 - 48724758
Protein evidence	Evidence at transcript level (all genes)
Ensembl	ENSG00000229637 (version 83.38)
Entrez gene	360205
UniProt	D3DTV9 (UniProt - Uncertain)
neXtProt	NX_D3DTV9
Antibodypedia	PRAC2 antibodies

PROTEIN BROWSER

PRAC2-001	PRAC2-002

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
PRAC2-001 ENSP00000481367 ENST00000422730	D3DTV9 [Direct mapping] Putative protein PRCA2 Show all	MEMSAT3 predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins Predicted secreted proteins Secreted proteins predicted by MDSEC Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Show all	GO:0005634 [nucleus] Show all	90 aa 10.4 kDa	Yes	0
PRAC2-002 ENSP00000484945 ENST00000432056	A0A087X2F6 [Direct mapping] Putative protein PRCA2 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Show all	GO:0016021 [integral component of membrane] Show all	140 aa 16 kDa	No	1

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.