Tissue expression of SMIM1 - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	1.3	TPM
GTEx:	0.6	RPKM
FANTOM5:	0.7	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Chondrocytes:	Low
Fibroblasts:	Not detected

Antibody staining	Antibody HPA069088
Chondrocytes	Low
Fibroblasts	Not detected

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Not detected

Antibody staining	Antibody HPA069088
Adipocytes	Not detected
Fibroblasts	Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	1.3

Female, age 80

Sample 1
TPM: 3.6

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 1.1

Female, age 57

Sample 3
TPM: 1.6

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 0.0

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 0.5

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	0.6

GTEx sample id

RPKM

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 0.5

Samples: 350

Max RPKM: 2.3
Min RPKM: 0
Std RPKM: 0.3
Median RPKM: 0.4

GTEX-11ZU8-2426-SM-5EQMV

2.3

GTEX-ZZ64-1626-SM-5E43W

1.6

GTEX-1314G-1626-SM-5EQ67

1.5

GTEX-ZT9X-1926-SM-57WE7

1.5

GTEX-ZXES-2026-SM-5NQ6R

1.5

GTEX-13RTJ-2526-SM-5S2Q3

1.4

GTEX-ZC5H-0126-SM-4WAYL

1.4

GTEX-1399U-2426-SM-5K7XB

1.3

Show all

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 0.9

Samples: 227

Max RPKM: 3
Min RPKM: 0
Std RPKM: 0.6
Median RPKM: 0.7

GTEX-13NZ9-2026-SM-5KM1U

3.0

GTEX-WWTW-1326-SM-4MVNT

2.8

GTEX-13PL6-0926-SM-5KLYY

2.7

GTEX-XLM4-1026-SM-4AT51

2.7

GTEX-11NUK-2026-SM-5PNVZ

2.6

GTEX-13G51-0526-SM-5IJCQ

2.6

GTEX-1212Z-0526-SM-5FQSQ

2.4

GTEX-13O3Q-1126-SM-5K7YK

2.4

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	0.7

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 0.7

FF:10010-101C1

65,65,76 years, mixed

0.7