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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:30.6TPM
GTEx:14.6RPKM
FANTOM5:14.8Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not available
Fibroblasts:Low
Peripheral nerve:Low
 

Antibody staining

Antibody HPA000525

  

Antibody CAB019285

  

Adipocytes

 Not detected   Medium  

Fibroblasts

 Not detected   Low  

Peripheral nerve

 Medium  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Fibroblasts:Low
Peripheral nerve:Low
Adipocytes:Low
 

Antibody staining

Antibody HPA000525

  

Antibody CAB019285

  

Fibroblasts

 Low   Medium  

Peripheral nerve

 Not detected   Low  

Adipocytes

 Medium  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

30.6
N/A Female, age 80
Sample 1
TPM: 23.9
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 20.6
N/A Female, age 57
Sample 3
TPM: 17.0
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 57.1
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 34.3
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

14.6

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 14.4
Samples: 350

Max RPKM: 25.1
Min RPKM: 5.3
Std RPKM: 2.3
Median RPKM: 14
GTEX-ZYVF-0226-SM-5GIEG 25.1
GTEX-POMQ-2326-SM-5S2VS 24.0
GTEX-NPJ8-0226-SM-48TBN 22.4
GTEX-QEG5-0326-SM-2S1PB 22.4
GTEX-TKQ1-1126-SM-4GIAZ 20.8
GTEX-Y5V6-2526-SM-5IFJV 20.6
GTEX-Q2AH-1726-SM-3NB2B 19.9
GTEX-Y8LW-1926-SM-4WWFZ 19.6
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 14.9
Samples: 227

Max RPKM: 34.7
Min RPKM: 9.3
Std RPKM: 3.2
Median RPKM: 14.3
GTEX-13X6H-1726-SM-5Q5EH 34.7
GTEX-Y5LM-0826-SM-4VDSW 31.4
GTEX-1128S-0926-SM-5GZZU 23.6
GTEX-1399S-1426-SM-5PNYQ 23.6
GTEX-ZZPU-0326-SM-5N9BJ 23.1
GTEX-ZYVF-1026-SM-5E44V 22.1
GTEX-133LE-0926-SM-5P9J1 21.9
GTEX-132QS-0826-SM-5K7WV 21.3
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

14.8

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 14.8
FF:10010-101C1 65,65,76 years, mixed 14.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.