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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:14.6TPM
GTEx:8.1RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Not detected
Neuropil:Not detected
 

Antibody staining

Antibody HPA045394

 

Antibody HPA045399

 

Antibody HPA046980

 

Endothelial cells

Not detected   Not detected   Not detected  

Glial cells

Not detected   Not detected   Not detected  

Neuronal cells

Not detected   Not detected   Not detected  

Neuropil

Not detected   Not detected   Not detected  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

14.6

N/A Male, age 5
Sample 1
TPM: 8.1
overview Female, age 40
Sample 2
TPM: 21.6
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 14.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

8.1

GTEx sample id

RPKM

7.58.910.63.215.1024681012141618202224
 
7.58.910.63.215.1024681012141618202224

Brain - Cortex

Brain - Cortex
RPKM: 9.5
Samples: 114

Max RPKM: 24.5
Min RPKM: 3.2
Std RPKM: 3.3
Median RPKM: 8.9
GTEX-QDT8-2926-SM-32PKC 24.5
GTEX-QMR6-1426-SM-32PLA 22.1
GTEX-11OF3-2926-SM-5HL78 21.3
GTEX-UTHO-3026-SM-3GAFB 20.0
GTEX-1117F-3226-SM-5N9CT 16.0
GTEX-QVUS-2826-SM-3GADB 16.0
GTEX-13FHO-3026-SM-5J1O9 15.1
GTEX-X585-3026-SM-46MWF 14.7
GTEX-N7MT-1126-SM-5SI7V 14.6
GTEX-XLM4-3026-SM-4AT6L 13.4
GTEX-111FC-3126-SM-5GZZ2 12.8
GTEX-11DXW-1126-SM-5H12Q 12.7
GTEX-12ZZZ-3026-SM-5BC67 12.6
GTEX-145LS-3126-SM-5Q5BY 12.6
GTEX-13S7M-3126-SM-5RQJQ 12.0
GTEX-13G51-3026-SM-5IJB8 11.9
GTEX-13OW8-2826-SM-5L3GC 11.8
GTEX-13NYB-3026-SM-5IJD7 11.7
GTEX-T6MN-2626-SM-32PMQ 11.6
GTEX-ZAK1-3026-SM-5S2MJ 11.6
GTEX-11O72-2926-SM-5BC4V 11.5
GTEX-11GS4-3126-SM-5A5LH 11.4
GTEX-11GSO-2926-SM-5HL73 11.3
GTEX-14ASI-3026-SM-5S2PN 11.1
GTEX-13OVH-3026-SM-5MR4N 11.0
GTEX-TSE9-3026-SM-3DB76 10.9
GTEX-12ZZY-3026-SM-5GCOU 10.8
GTEX-RNOR-2326-SM-2TF4I 10.7
GTEX-13QIC-2926-SM-5J2NF 10.6
GTEX-ZVT3-3026-SM-5E43N 10.6
GTEX-13FXS-3126-SM-5J2NN 10.5
GTEX-145MF-2726-SM-5O995 10.5
GTEX-13OVJ-2826-SM-5L3GW 10.4
GTEX-11ONC-2926-SM-5P9JM 10.1
GTEX-13VXU-2926-SM-5LU5C 10.1
GTEX-X4XX-3026-SM-3NMB2 10.0
GTEX-131YS-3126-SM-5KLYT 9.9
GTEX-13FHP-3026-SM-5IJBS 9.9
GTEX-13X6K-2926-SM-5Q5D5 9.9
GTEX-PVOW-2526-SM-2XCF7 9.9
GTEX-ZYFD-3026-SM-5E44C 9.9
GTEX-12WSD-3126-SM-5HL7P 9.8
GTEX-132Q8-3026-SM-5PNVG 9.8
GTEX-13FLW-1426-SM-5K7YE 9.8
GTEX-ZZPT-3026-SM-5GZXH 9.7
GTEX-13NYS-3126-SM-5KLYV 9.6
GTEX-1192X-3126-SM-5N9BY 9.4
GTEX-YFC4-3126-SM-5PNV6 9.4
GTEX-12WSH-3026-SM-5CVNI 9.3
GTEX-13PVQ-3026-SM-5SI93 9.3
GTEX-Q2AG-2926-SM-2HMJ3 9.3
GTEX-XOTO-3026-SM-4B65M 9.2
GTEX-13PL6-3126-SM-5LUAR 9.1
GTEX-145MG-3026-SM-5RQJA 9.1
GTEX-1399T-3026-SM-5KLZC 9.0
GTEX-11EMC-3226-SM-5EGKW 8.9
GTEX-145MH-3026-SM-5Q5DZ 8.9
GTEX-14BMV-3026-SM-5S2PQ 8.9
GTEX-12WSA-2926-SM-5EQ4D 8.8
GTEX-13OW6-3026-SM-5J2MI 8.8
GTEX-144GL-3026-SM-5Q5CW 8.7
GTEX-1128S-2726-SM-5H12C 8.6
GTEX-NPJ7-2726-SM-2I3FT 8.5
GTEX-ZAJG-3126-SM-5HL9J 8.5
GTEX-11EI6-3026-SM-5GZZO 8.4
GTEX-YJ89-3026-SM-5IFJI 8.4
GTEX-12ZZW-2926-SM-5LZUP 8.3
GTEX-13JVG-3126-SM-5L3FH 8.3
GTEX-13O3O-3126-SM-5KM3H 8.3
GTEX-11NUK-2926-SM-5A5MD 8.2
GTEX-PWO3-0926-SM-2I5EY 8.2
GTEX-R55F-1326-SM-5S2V4 8.2
GTEX-117XS-3026-SM-5N9CA 8.1
GTEX-11DXY-3226-SM-5GIDE 8.1
GTEX-13SLX-3126-SM-5S2Q5 8.1
GTEX-147GR-3026-SM-5S2ML 8.1
GTEX-13X6J-3026-SM-5Q5CU 8.0
GTEX-T5JC-2426-SM-3NMDB 8.0
GTEX-WL46-2926-SM-3LK82 8.0
GTEX-1313W-3126-SM-5LZUI 7.9
GTEX-QVJO-1426-SM-2S1QY 7.9
GTEX-12WSC-3026-SM-5GCNF 7.8
GTEX-13OW7-3026-SM-5L3GY 7.8
GTEX-11TTK-2926-SM-5PNYP 7.7
GTEX-Y111-2726-SM-4TT3N 7.6
GTEX-11OC5-0726-SM-5P9JK 7.4
GTEX-13NYC-2826-SM-5K7WR 7.4
GTEX-14A5I-2926-SM-5Q5CQ 7.4
GTEX-11PRG-2926-SM-5987A 7.1
GTEX-ZE7O-3126-SM-5HL5X 7.1
GTEX-11ZUS-2926-SM-5FQSL 6.9
GTEX-139T8-1026-SM-5J2MC 6.9
GTEX-12ZZX-2926-SM-5GCOQ 6.8
GTEX-13O3Q-2926-SM-5KM45 6.8
GTEX-1445S-3026-SM-5O9BR 6.8
GTEX-11GSP-3226-SM-5986O 6.7
GTEX-OXRN-2426-SM-2I5EQ 6.7
GTEX-T2IS-3026-SM-32QPM 6.6
GTEX-12126-1026-SM-5P9JJ 6.5
GTEX-NPJ8-1526-SM-2D7VU 6.5
GTEX-131XW-3126-SM-5LZUC 6.4
GTEX-13JUV-2926-SM-5LZX7 6.0
GTEX-Y8DK-0826-SM-4TT3T 6.0
GTEX-11WQK-3026-SM-5EQL6 5.9
GTEX-RU72-3026-SM-5SI7Y 5.9
GTEX-WZTO-2926-SM-3NM9I 5.9
GTEX-ZUA1-3026-SM-59HJC 5.9
GTEX-144FL-3026-SM-5O99C 5.7
GTEX-13IVO-2926-SM-5L3CZ 5.3
GTEX-WHSE-3026-SM-3P5ZH 5.2
GTEX-WVLH-3026-SM-3MJG9 5.2
GTEX-WWYW-3126-SM-3NB39 5.0
GTEX-Z93S-2926-SM-57WB9 4.5
GTEX-11NV4-2126-SM-5N9DS 3.2
Show all
5.26.58.11.211.90246810121416
 
5.26.58.11.211.90246810121416

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 6.7
Samples: 108

Max RPKM: 16
Min RPKM: 1.2
Std RPKM: 2.6
Median RPKM: 6.5
GTEX-QMR6-0011-R10A-SM-32PKO 16.0
GTEX-QDT8-0011-R10A-SM-32PKG 14.9
GTEX-QVUS-0011-R10A-SM-3GIK3 14.4
GTEX-P44H-0011-R10A-SM-2XCEK 12.9
GTEX-13CZV-0011-R10b-SM-5LZYD 11.9
GTEX-XLM4-0011-R10A-SM-4AT5P 11.6
GTEX-X585-0011-R10A-SM-46MUY 11.1
GTEX-QVJO-0011-R10A-SM-2S1QJ 10.5
GTEX-12WSF-0011-R10a-SM-5LZVH 10.2
GTEX-13FHO-0011-R10b-SM-5J2MM 9.9
GTEX-13RTJ-0011-R10b-SM-5O9CW 9.8
GTEX-14ASI-0011-R10b-SM-5S2VZ 9.8
GTEX-RVPU-0011-R10A-SM-2XCAH 9.6
GTEX-13QIC-0011-R10a-SM-5O9C7 9.5
GTEX-T6MN-0011-R10A-SM-32QP7 9.5
GTEX-NPJ7-0011-R10A-SM-2I3E5 9.4
GTEX-S7SE-0011-R10A-SM-2XCDF 9.4
GTEX-13OVJ-0011-R10b-SM-5L3HT 9.2
GTEX-WVLH-0011-R10A-SM-3MJFM 8.9
GTEX-ZDXO-0011-R10a-SM-4WWD8 8.9
GTEX-11H98-0011-R10b-SM-5NQ98 8.7
GTEX-13FLV-0011-R10b-SM-5LZZ2 8.6
GTEX-ZAB4-0011-R10a-SM-4SOKH 8.6
GTEX-132Q8-0011-R10b-SM-5DUWZ 8.5
GTEX-14BIL-0011-R10a-SM-5SI75 8.4
GTEX-145LS-0011-R10a-SM-5PNUQ 8.3
GTEX-12WSH-0011-R10a-SM-5LZUS 8.1
GTEX-13FLW-0011-R10b-SM-5LZZF 8.1
GTEX-145MH-0011-R10b-SM-5PNUK 8.1
GTEX-N7MT-0011-R10A-SM-2I3E1 8.1
GTEX-X4EP-0011-R10B-SM-4QASJ 8.0
GTEX-YFC4-0011-R10a-SM-4SOK5 7.9
GTEX-13FXS-0011-R10a-SM-5J2MA 7.8
GTEX-13FTZ-0011-R10b-SM-5KLZS 7.6
GTEX-13NYB-0011-R10a-SM-5KM43 7.6
GTEX-13SLX-0011-R10a-SM-5P9HV 7.6
GTEX-13OW6-0011-R10a-SM-5L3HE 7.5
GTEX-13OW8-0011-R10a-SM-5L3H6 7.4
GTEX-X4XX-0011-R10B-SM-46MWO 7.4
GTEX-WL46-0011-R10A-SM-3MJFQ 7.3
GTEX-147F4-0011-R10b-SM-5S2WC 7.2
GTEX-WWYW-0011-R10A-SM-3NB35 7.2
GTEX-13O3O-0011-R10a-SM-5LUA9 7.1
GTEX-13O3Q-0011-R10b-SM-5KM39 7.1
GTEX-Y8DK-0011-R10A-SM-4SOK1 7.1
GTEX-13N1W-0011-R10b-SM-5MR4H 7.0
GTEX-13OW7-0011-R10a-SM-5L3H3 6.9
GTEX-ZF28-0011-R10a-SM-4WWEH 6.9
GTEX-11GSP-0011-R10a-SM-5NQ7J 6.8
GTEX-OXRN-0011-R10A-SM-2I5GC 6.8
GTEX-ZVT3-0011-R10b-SM-57WB6 6.8
GTEX-131YS-0011-R10b-SM-5EQ5N 6.7
GTEX-131XH-0011-R10a-SM-5EGLJ 6.6
GTEX-13SLW-0011-R10a-SM-5S2UI 6.5
GTEX-NPJ8-0011-R10A-SM-2YUMO 6.5
GTEX-N7MS-0011-R10A-SM-2HMJK 6.4
GTEX-T5JC-0011-R10A-SM-32PM2 6.4
GTEX-12ZZX-0011-R10b-SM-5DUWK 6.2
GTEX-13OVL-0011-R10a-SM-5L3GS 6.2
GTEX-TSE9-0011-R10A-SM-3DB7O 6.2
GTEX-13NYS-0011-R10a-SM-5MR4S 6.1
GTEX-13X6K-0011-R10a-SM-5P9JR 6.1
GTEX-13G51-0011-R10b-SM-5LZYF 5.9
GTEX-13JUV-0011-R10b-SM-5LZXR 5.9
GTEX-XMD1-0011-R10A-SM-4AT4A 5.9
GTEX-1477Z-0011-R10b-SM-5S2RF 5.8
GTEX-13JVG-0011-R10b-SM-5KM2P 5.7
GTEX-WZTO-0011-R10B-SM-4E3KB 5.7
GTEX-YJ89-0011-R10a-SM-4SOK9 5.7
GTEX-1313W-0011-R10b-SM-5DUXA 5.6
GTEX-14BIN-0011-R10a-SM-5S2UA 5.6
GTEX-NL3H-0011-R10A-SM-2I3E9 5.6
GTEX-Z93S-0011-R10a-SM-4RGNM 5.6
GTEX-ZUA1-0011-R10a-SM-51MT6 5.6
GTEX-11WQC-0011-R10a-SM-57WCT 5.5
GTEX-12WSE-0011-R10b-SM-5P9JV 5.5
GTEX-Q2AG-0011-R10A-SM-2HMLA 5.5
GTEX-X261-0011-R10B-SM-4E3JT 5.4
GTEX-12WSM-0011-R10a-SM-5DUWV 5.3
GTEX-ZE7O-0011-R10a-SM-57WAZ 5.3
GTEX-12ZZW-0011-R10b-SM-5HL9X 5.2
GTEX-13QJC-0011-R10a-SM-5SI63 5.1
GTEX-12WSA-0011-R10b-SM-5P9ET 5.0
GTEX-147GR-0011-R10b-SM-5S2UM 5.0
GTEX-13NZA-0011-R10b-SM-5KM54 4.9
GTEX-13S7M-0011-R10b-SM-5PNZB 4.7
GTEX-145LU-0011-R10a-SM-5PNWJ 4.7
GTEX-12WSC-0011-R10a-SM-5GU57 4.4
GTEX-ZVZQ-0011-R10b-SM-51MRT 4.4
GTEX-12126-0011-R10b-SM-5BC6T 4.3
GTEX-1445S-0011-R10a-SM-5PNWB 4.3
GTEX-131XW-0011-R10a-SM-5DUVA 4.2
GTEX-13X6I-0011-R10a-SM-5PNWI 4.0
GTEX-14753-0011-R10b-SM-5S2WE 4.0
GTEX-ZV68-0011-R10a-SM-51MT7 3.9
GTEX-NL4W-0011-R10A-SM-2I3DY 3.8
GTEX-13N2G-0011-R10a-SM-5MR34 3.7
GTEX-12ZZZ-0011-R10a-SM-5P9HC 3.3
GTEX-13X6J-0011-R10b-SM-5PNWA 3.3
GTEX-OXRO-0011-R10A-SM-2I5EH 3.3
GTEX-ZXG5-0011-R10a-SM-57WDD 3.0
GTEX-11ZUS-0011-R10b-SM-5BC79 2.9
GTEX-145MG-0011-R10a-SM-5PNWG 2.9
GTEX-13IVO-0011-R10a-SM-5LZY3 2.4
GTEX-11WQK-0011-R10a-SM-5BC6R 2.3
GTEX-12ZZY-0011-R10b-SM-5HL7W 1.9
GTEX-12WSD-0011-R10b-SM-5GU79 1.7
GTEX-139TS-0011-R10a-SM-5K7TU 1.2
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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