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YJEFN3
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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:78.1RPKM
FANTOM5:165.0Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Low
 

Antibody staining

Antibody HPA060789

 

Glial cells

Not detected  

Neuronal cells

Low  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

78.1

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 78.1
Samples: 117

Max RPKM: 178.1
Min RPKM: 18.6
Std RPKM: 31.4
Median RPKM: 82.1
GTEX-ZUA1-0011-R5b-SM-51MTG 178.1
GTEX-13X6K-0011-R5b-SM-5PNUE 137.2
GTEX-13FXS-0011-R5b-SM-5LZYE 134.8
GTEX-X585-0011-R5A-SM-46MVI 132.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 130.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 130.4
GTEX-12WSC-0011-R5b-SM-5CVNS 128.0
GTEX-13FLW-0011-R5a-SM-5LZX6 126.7
GTEX-1399T-0011-R5b-SM-5IJDK 125.8
GTEX-145MH-0011-R5a-SM-5P9JT 122.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 122.1
GTEX-13NYB-0011-R5a-SM-5MR45 121.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 121.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 117.5
GTEX-13G51-0011-R5a-SM-5L3EB 116.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 114.4
GTEX-13O3O-0011-R5b-SM-5KM44 110.8
GTEX-YJ89-0011-R5a-SM-4V6GM 105.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 105.0
GTEX-WWYW-0011-R5A-SM-3NB3E 104.8
GTEX-13VXU-0011-R5a-SM-5O9D7 104.6
GTEX-11NV4-0011-R5a-SM-5NQ88 103.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 103.5
GTEX-13CIG-0011-R5b-SM-5L3F2 102.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 102.7
GTEX-13SLX-0011-R5a-SM-5O9BV 102.2
GTEX-XOTO-0011-R5A-SM-4B657 101.0
GTEX-13CZV-0011-R5a-SM-5K7XA 99.4
GTEX-ZE7O-0011-R5a-SM-57WBO 98.6
GTEX-12WSD-0011-R5b-SM-5CVNG 98.4
GTEX-T6MN-0011-R5A-SM-32QPD 98.3
GTEX-145LS-0011-R5a-SM-5SI65 98.2
GTEX-11GSP-0011-R5a-SM-57WBE 98.0
GTEX-11OF3-0011-R5a-SM-57WB4 96.8
GTEX-WL46-0011-R5A-SM-3LK6V 96.3
GTEX-13X6J-0011-R5b-SM-5PNWT 95.3
GTEX-14BIM-0011-R5b-SM-5S2RM 94.4
GTEX-1313W-0011-R5b-SM-5L3EP 94.0
GTEX-13OVH-0011-R5b-SM-5KM4L 94.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 93.0
GTEX-13FLV-0011-R5a-SM-5LZWT 91.1
GTEX-13OW7-0011-R5b-SM-5O9DM 91.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 89.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 89.9
GTEX-12ZZX-0011-R5a-SM-5HL89 89.7
GTEX-Z93S-0011-R5b-SM-4RGNI 89.4
GTEX-12WSF-0011-R5a-SM-5HL8K 89.1
GTEX-T5JC-0011-R5A-SM-32PLK 87.9
GTEX-14ABY-0011-R5b-SM-5SI7B 87.8
GTEX-TSE9-0011-R5A-SM-3DB7J 87.8
GTEX-14BIN-0011-R5b-SM-5SI78 87.5
GTEX-11H98-0011-R5b-SM-57WCF 86.5
GTEX-13OVL-0011-R5b-SM-5L3FU 86.4
GTEX-131YS-0011-R5b-SM-5K7YB 85.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 84.8
GTEX-WZTO-0011-R5B-SM-3NMC5 84.0
GTEX-RVPV-0011-R5A-SM-2TF69 83.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 82.4
GTEX-WVLH-0011-R5A-SM-3MJFW 82.1
GTEX-13JUV-0011-R5a-SM-5LZY5 81.8
GTEX-13OW5-0011-R5b-SM-5L3FR 81.0
GTEX-13OW6-0011-R5a-SM-5O9BK 78.7
GTEX-13S7M-0011-R5b-SM-5P9HS 78.5
GTEX-N7MS-0011-R5a-SM-2HMK8 78.5
GTEX-13JVG-0011-R5a-SM-5MR4O 78.0
GTEX-R55E-0011-R5A-SM-2TC5N 76.8
GTEX-WHSE-0011-R5A-SM-3P5ZO 76.7
GTEX-13NYS-0011-R5a-SM-5MR4D 75.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 73.9
GTEX-ZV68-0011-R5a-SM-4YCDW 72.3
GTEX-RU72-0011-R5A-SM-2TF6U 71.7
GTEX-12WSB-0011-R5b-SM-5GU67 70.1
GTEX-ZXG5-0011-R5b-SM-57WBN 68.2
GTEX-139TT-0011-R5b-SM-5K7W8 68.0
GTEX-S7SE-0011-R5A-SM-2XCDA 67.3
GTEX-YFC4-0011-R5a-SM-4RGLR 67.1
GTEX-144GL-0011-R5b-SM-5PNUJ 63.6
GTEX-13X6I-0011-R5a-SM-5PNWW 63.4
GTEX-13112-0011-R5b-SM-5DUV8 62.8
GTEX-13FHP-0011-R5b-SM-5LZY2 62.1
GTEX-OHPN-0011-R5A-SM-2I5FF 60.8
GTEX-11WQC-0011-R5a-SM-5BC74 59.1
GTEX-132Q8-0011-R5a-SM-5IJDM 58.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 56.3
GTEX-X261-0011-R5A-SM-3NMB4 55.7
GTEX-N7MT-0011-R5a-SM-2I3G6 53.8
GTEX-RVPU-0011-R5A-SM-2XCAD 53.6
GTEX-X4XX-0011-R5A-SM-46MWN 51.8
GTEX-12WSA-0011-R5b-SM-5GU5I 51.6
GTEX-ZVT3-0011-R5a-SM-51MSI 51.6
GTEX-144GO-0011-R5a-SM-5PNUR 49.5
GTEX-XMD1-0011-R5A-SM-4AT47 49.3
GTEX-139T8-0011-R5b-SM-5J1MO 47.1
GTEX-P44H-0011-R5A-SM-2XCEX 44.3
GTEX-139TS-0011-R5b-SM-5J2MZ 43.9
GTEX-1477Z-0011-R5b-SM-5PNUO 43.2
GTEX-UTHO-0011-R5A-SM-3GIJD 40.8
GTEX-145MG-0011-R5b-SM-5S2VU 38.4
GTEX-12WSH-0011-R5b-SM-5P9F3 37.6
GTEX-NL3H-0011-R5a-SM-2I3GB 37.1
GTEX-13CF2-0011-R5a-SM-5LZWS 36.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 34.8
GTEX-NPJ7-0011-R5a-SM-33HBK 34.6
GTEX-1445S-0011-R5a-SM-5PNUS 33.5
GTEX-QMR6-0011-R5A-SM-32PKT 33.0
GTEX-NL4W-0011-R5a-SM-2I3GD 32.1
GTEX-OXRN-0011-R5A-SM-2I5EF 32.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 31.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 31.7
GTEX-PVOW-0011-R5A-SM-32PL7 30.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 29.7
GTEX-T2IS-0011-R5A-SM-32QP4 29.3
GTEX-S7PM-0011-R5A-SM-3NM8G 29.1
GTEX-11UD1-0011-R5b-SM-5P9FP 29.0
GTEX-QVJO-0011-R5A-SM-2S1QM 28.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 27.5
GTEX-13NZA-0011-R5b-SM-5KM4K 18.6
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

165.0

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 165.0
FF:10379-105H1 89 years, female 208.6
FF:10164-103B2 76 years, female 121.4

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