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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:15.7TPM
GTEx:36.2RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Not detected
Neuropil:Not detected
 

Antibody staining

Antibody HPA060789

 

Endothelial cells

Not detected  

Glial cells

Not detected  

Neuronal cells

Not detected  

Neuropil

Not detected  
 
 

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

15.7

N/A Male, age 5
Sample 1
TPM: 31.2
overview Female, age 40
Sample 2
TPM: 3.5
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 12.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

36.2

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 37.3
Samples: 114

Max RPKM: 67.1
Min RPKM: 2.9
Std RPKM: 12.8
Median RPKM: 37.3
GTEX-13QIC-2926-SM-5J2NF 67.1
GTEX-145MG-3026-SM-5RQJA 66.6
GTEX-13SLX-3126-SM-5S2Q5 63.3
GTEX-13IVO-2926-SM-5L3CZ 62.1
GTEX-ZAJG-3126-SM-5HL9J 61.7
GTEX-11OC5-0726-SM-5P9JK 60.1
GTEX-117XS-3026-SM-5N9CA 58.5
GTEX-131YS-3126-SM-5KLYT 55.7
GTEX-Y111-2726-SM-4TT3N 53.9
GTEX-ZE7O-3126-SM-5HL5X 53.2
GTEX-11EMC-3226-SM-5EGKW 52.7
GTEX-13OW6-3026-SM-5J2MI 51.9
GTEX-11EI6-3026-SM-5GZZO 51.1
GTEX-13NYB-3026-SM-5IJD7 50.9
GTEX-12WSH-3026-SM-5CVNI 50.5
GTEX-12ZZW-2926-SM-5LZUP 50.3
GTEX-1399T-3026-SM-5KLZC 49.9
GTEX-12WSC-3026-SM-5GCNF 49.8
GTEX-1128S-2726-SM-5H12C 49.7
GTEX-11NUK-2926-SM-5A5MD 49.5
GTEX-13FXS-3126-SM-5J2NN 49.4
GTEX-T5JC-2426-SM-3NMDB 49.4
GTEX-ZYFD-3026-SM-5E44C 49.4
GTEX-Y8DK-0826-SM-4TT3T 49.2
GTEX-13OVH-3026-SM-5MR4N 48.1
GTEX-13O3Q-2926-SM-5KM45 47.5
GTEX-YJ89-3026-SM-5IFJI 47.5
GTEX-13S7M-3126-SM-5RQJQ 46.7
GTEX-ZVT3-3026-SM-5E43N 46.4
GTEX-XOTO-3026-SM-4B65M 45.5
GTEX-14ASI-3026-SM-5S2PN 45.3
GTEX-Z93S-2926-SM-57WB9 44.6
GTEX-XLM4-3026-SM-4AT6L 44.1
GTEX-13O3O-3126-SM-5KM3H 44.0
GTEX-14A5I-2926-SM-5Q5CQ 44.0
GTEX-12WSD-3126-SM-5HL7P 43.9
GTEX-11PRG-2926-SM-5987A 43.7
GTEX-1192X-3126-SM-5N9BY 43.6
GTEX-Q2AG-2926-SM-2HMJ3 43.6
GTEX-WL46-2926-SM-3LK82 43.4
GTEX-ZUA1-3026-SM-59HJC 43.2
GTEX-X4XX-3026-SM-3NMB2 42.5
GTEX-11ONC-2926-SM-5P9JM 42.2
GTEX-11GSO-2926-SM-5HL73 41.8
GTEX-13PL6-3126-SM-5LUAR 41.6
GTEX-145LS-3126-SM-5Q5BY 41.2
GTEX-14BMV-3026-SM-5S2PQ 41.1
GTEX-X585-3026-SM-46MWF 40.7
GTEX-12126-1026-SM-5P9JJ 40.6
GTEX-12ZZX-2926-SM-5GCOQ 40.5
GTEX-WWYW-3126-SM-3NB39 40.5
GTEX-12ZZZ-3026-SM-5BC67 40.3
GTEX-11DXY-3226-SM-5GIDE 39.8
GTEX-T6MN-2626-SM-32PMQ 39.3
GTEX-11ZUS-2926-SM-5FQSL 39.0
GTEX-13JVG-3126-SM-5L3FH 37.8
GTEX-R55F-1326-SM-5S2V4 37.5
GTEX-144FL-3026-SM-5O99C 37.2
GTEX-12ZZY-3026-SM-5GCOU 37.1
GTEX-13OW7-3026-SM-5L3GY 36.9
GTEX-131XW-3126-SM-5LZUC 36.8
GTEX-RU72-3026-SM-5SI7Y 36.8
GTEX-WVLH-3026-SM-3MJG9 36.8
GTEX-13FLW-1426-SM-5K7YE 36.3
GTEX-145MF-2726-SM-5O995 35.4
GTEX-WHSE-3026-SM-3P5ZH 35.3
GTEX-11GS4-3126-SM-5A5LH 34.4
GTEX-13NYS-3126-SM-5KLYV 34.3
GTEX-1313W-3126-SM-5LZUI 34.1
GTEX-139T8-1026-SM-5J2MC 33.9
GTEX-11DXW-1126-SM-5H12Q 32.7
GTEX-145MH-3026-SM-5Q5DZ 32.6
GTEX-RNOR-2326-SM-2TF4I 32.3
GTEX-13X6K-2926-SM-5Q5D5 31.9
GTEX-13OW8-2826-SM-5L3GC 31.8
GTEX-ZAK1-3026-SM-5S2MJ 31.8
GTEX-WZTO-2926-SM-3NM9I 31.6
GTEX-13VXU-2926-SM-5LU5C 31.2
GTEX-132Q8-3026-SM-5PNVG 29.9
GTEX-13OVJ-2826-SM-5L3GW 29.7
GTEX-13PVQ-3026-SM-5SI93 29.2
GTEX-13NYC-2826-SM-5K7WR 29.0
GTEX-13FHP-3026-SM-5IJBS 28.8
GTEX-11O72-2926-SM-5BC4V 28.5
GTEX-ZZPT-3026-SM-5GZXH 28.5
GTEX-YFC4-3126-SM-5PNV6 28.4
GTEX-11WQK-3026-SM-5EQL6 28.2
GTEX-QVJO-1426-SM-2S1QY 28.1
GTEX-144GL-3026-SM-5Q5CW 27.4
GTEX-11NV4-2126-SM-5N9DS 27.3
GTEX-11GSP-3226-SM-5986O 27.0
GTEX-147GR-3026-SM-5S2ML 27.0
GTEX-13JUV-2926-SM-5LZX7 26.2
GTEX-111FC-3126-SM-5GZZ2 26.0
GTEX-13X6J-3026-SM-5Q5CU 26.0
GTEX-1117F-3226-SM-5N9CT 25.9
GTEX-11OF3-2926-SM-5HL78 25.2
GTEX-1445S-3026-SM-5O9BR 24.9
GTEX-T2IS-3026-SM-32QPM 23.7
GTEX-13FHO-3026-SM-5J1O9 22.7
GTEX-N7MT-1126-SM-5SI7V 20.9
GTEX-PVOW-2526-SM-2XCF7 20.6
GTEX-NPJ8-1526-SM-2D7VU 20.2
GTEX-TSE9-3026-SM-3DB76 19.4
GTEX-OXRN-2426-SM-2I5EQ 18.9
GTEX-QMR6-1426-SM-32PLA 16.8
GTEX-NPJ7-2726-SM-2I3FT 16.1
GTEX-11TTK-2926-SM-5PNYP 15.8
GTEX-12WSA-2926-SM-5EQ4D 14.3
GTEX-QVUS-2826-SM-3GADB 13.4
GTEX-13G51-3026-SM-5IJB8 12.4
GTEX-QDT8-2926-SM-32PKC 11.6
GTEX-PWO3-0926-SM-2I5EY 11.1
GTEX-UTHO-3026-SM-3GAFB 2.9
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 35.2
Samples: 108

Max RPKM: 87
Min RPKM: 5.8
Std RPKM: 14.8
Median RPKM: 32.9
GTEX-13O3O-0011-R10a-SM-5LUA9 87.0
GTEX-13OW6-0011-R10a-SM-5L3HE 72.2
GTEX-12ZZY-0011-R10b-SM-5HL7W 69.9
GTEX-13NYS-0011-R10a-SM-5MR4S 67.1
GTEX-13OW7-0011-R10a-SM-5L3H3 66.8
GTEX-12WSH-0011-R10a-SM-5LZUS 65.3
GTEX-13SLX-0011-R10a-SM-5P9HV 65.3
GTEX-13O3Q-0011-R10b-SM-5KM39 59.5
GTEX-13NYB-0011-R10a-SM-5KM43 58.8
GTEX-12WSC-0011-R10a-SM-5GU57 56.6
GTEX-14ASI-0011-R10b-SM-5S2VZ 55.5
GTEX-13FXS-0011-R10a-SM-5J2MA 53.0
GTEX-13N1W-0011-R10b-SM-5MR4H 52.2
GTEX-12ZZX-0011-R10b-SM-5DUWK 52.1
GTEX-1313W-0011-R10b-SM-5DUXA 51.9
GTEX-13IVO-0011-R10a-SM-5LZY3 49.8
GTEX-14BIN-0011-R10a-SM-5S2UA 49.7
GTEX-X261-0011-R10B-SM-4E3JT 49.4
GTEX-13FTZ-0011-R10b-SM-5KLZS 49.0
GTEX-ZF28-0011-R10a-SM-4WWEH 47.9
GTEX-11WQC-0011-R10a-SM-57WCT 46.1
GTEX-12WSM-0011-R10a-SM-5DUWV 45.6
GTEX-13QJC-0011-R10a-SM-5SI63 45.5
GTEX-147GR-0011-R10b-SM-5S2UM 44.1
GTEX-139TS-0011-R10a-SM-5K7TU 43.0
GTEX-131XH-0011-R10a-SM-5EGLJ 42.4
GTEX-T5JC-0011-R10A-SM-32PM2 42.4
GTEX-XLM4-0011-R10A-SM-4AT5P 42.2
GTEX-ZV68-0011-R10a-SM-51MT7 41.7
GTEX-Z93S-0011-R10a-SM-4RGNM 41.1
GTEX-145LU-0011-R10a-SM-5PNWJ 40.9
GTEX-12WSF-0011-R10a-SM-5LZVH 40.6
GTEX-13QIC-0011-R10a-SM-5O9C7 40.5
GTEX-14BIL-0011-R10a-SM-5SI75 40.2
GTEX-131XW-0011-R10a-SM-5DUVA 39.9
GTEX-13FLV-0011-R10b-SM-5LZZ2 39.8
GTEX-12ZZZ-0011-R10a-SM-5P9HC 39.7
GTEX-13CZV-0011-R10b-SM-5LZYD 39.7
GTEX-ZUA1-0011-R10a-SM-51MT6 39.5
GTEX-X4XX-0011-R10B-SM-46MWO 39.1
GTEX-Y8DK-0011-R10A-SM-4SOK1 39.0
GTEX-13X6J-0011-R10b-SM-5PNWA 38.2
GTEX-ZVZQ-0011-R10b-SM-51MRT 38.2
GTEX-12126-0011-R10b-SM-5BC6T 38.0
GTEX-13SLW-0011-R10a-SM-5S2UI 37.8
GTEX-131YS-0011-R10b-SM-5EQ5N 37.5
GTEX-13RTJ-0011-R10b-SM-5O9CW 37.5
GTEX-ZVT3-0011-R10b-SM-57WB6 36.4
GTEX-ZDXO-0011-R10a-SM-4WWD8 36.0
GTEX-YJ89-0011-R10a-SM-4SOK9 34.5
GTEX-YFC4-0011-R10a-SM-4SOK5 33.9
GTEX-12WSD-0011-R10b-SM-5GU79 33.5
GTEX-13G51-0011-R10b-SM-5LZYF 33.1
GTEX-TSE9-0011-R10A-SM-3DB7O 33.1
GTEX-X4EP-0011-R10B-SM-4QASJ 32.7
GTEX-13OVL-0011-R10a-SM-5L3GS 32.2
GTEX-ZAB4-0011-R10a-SM-4SOKH 32.2
GTEX-145MG-0011-R10a-SM-5PNWG 31.9
GTEX-NL3H-0011-R10A-SM-2I3E9 31.7
GTEX-X585-0011-R10A-SM-46MUY 31.5
GTEX-145MH-0011-R10b-SM-5PNUK 30.8
GTEX-WWYW-0011-R10A-SM-3NB35 30.5
GTEX-N7MS-0011-R10A-SM-2HMJK 30.4
GTEX-13FLW-0011-R10b-SM-5LZZF 30.3
GTEX-WL46-0011-R10A-SM-3MJFQ 29.2
GTEX-13NZA-0011-R10b-SM-5KM54 28.8
GTEX-13OW8-0011-R10a-SM-5L3H6 28.6
GTEX-12WSE-0011-R10b-SM-5P9JV 28.3
GTEX-13S7M-0011-R10b-SM-5PNZB 28.3
GTEX-T6MN-0011-R10A-SM-32QP7 28.3
GTEX-11H98-0011-R10b-SM-5NQ98 28.2
GTEX-WZTO-0011-R10B-SM-4E3KB 27.6
GTEX-13OVJ-0011-R10b-SM-5L3HT 27.4
GTEX-145LS-0011-R10a-SM-5PNUQ 27.4
GTEX-S7SE-0011-R10A-SM-2XCDF 27.3
GTEX-ZXG5-0011-R10a-SM-57WDD 27.0
GTEX-NPJ8-0011-R10A-SM-2YUMO 26.8
GTEX-13X6K-0011-R10a-SM-5P9JR 26.4
GTEX-13FHO-0011-R10b-SM-5J2MM 26.3
GTEX-11GSP-0011-R10a-SM-5NQ7J 25.6
GTEX-132Q8-0011-R10b-SM-5DUWZ 25.0
GTEX-13JVG-0011-R10b-SM-5KM2P 24.6
GTEX-N7MT-0011-R10A-SM-2I3E1 24.3
GTEX-12ZZW-0011-R10b-SM-5HL9X 24.0
GTEX-11ZUS-0011-R10b-SM-5BC79 23.8
GTEX-1477Z-0011-R10b-SM-5S2RF 23.7
GTEX-13JUV-0011-R10b-SM-5LZXR 23.3
GTEX-11WQK-0011-R10a-SM-5BC6R 22.7
GTEX-147F4-0011-R10b-SM-5S2WC 21.8
GTEX-OXRO-0011-R10A-SM-2I5EH 21.6
GTEX-1445S-0011-R10a-SM-5PNWB 21.4
GTEX-14753-0011-R10b-SM-5S2WE 21.4
GTEX-RVPU-0011-R10A-SM-2XCAH 21.2
GTEX-13X6I-0011-R10a-SM-5PNWI 20.6
GTEX-WVLH-0011-R10A-SM-3MJFM 20.5
GTEX-Q2AG-0011-R10A-SM-2HMLA 20.3
GTEX-13N2G-0011-R10a-SM-5MR34 18.5
GTEX-NL4W-0011-R10A-SM-2I3DY 17.8
GTEX-OXRN-0011-R10A-SM-2I5GC 15.7
GTEX-12WSA-0011-R10b-SM-5P9ET 15.6
GTEX-QMR6-0011-R10A-SM-32PKO 15.3
GTEX-ZE7O-0011-R10a-SM-57WAZ 14.3
GTEX-NPJ7-0011-R10A-SM-2I3E5 13.6
GTEX-P44H-0011-R10A-SM-2XCEK 13.3
GTEX-XMD1-0011-R10A-SM-4AT4A 12.6
GTEX-QVUS-0011-R10A-SM-3GIK3 9.3
GTEX-QVJO-0011-R10A-SM-2S1QJ 8.6
GTEX-QDT8-0011-R10A-SM-32PKG 5.8
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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