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TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:57.2RPKM
FANTOM5:35.9Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Medium
Processes/nerve bundles:Not detected
 

Extended tissue profile- Antibody HPA060789

Glial cells

Not detected

Neuronal cells

Medium

Processes/nerve bundles

Low
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Antibody staining

Antibody HPA060789

 

Glial cells

Not detected  

Neuronal cells

Medium  
 
 
 

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

57.2

GTEx sample id

RPKM

27.447.477.85.5151.2020406080100120140160180200220240
 
27.447.477.85.5151.2020406080100120140160180200220240

Brain - Hippocampus

Brain - Hippocampus
RPKM: 57.2
Samples: 94

Max RPKM: 241
Min RPKM: 5.5
Std RPKM: 40.6
Median RPKM: 47.4
GTEX-144GL-0011-R1a-SM-5PNZ5 241.0
GTEX-13FXS-0011-R1a-SM-5K7U6 177.3
GTEX-13PDP-0011-R1a-SM-5PNX5 151.2
GTEX-13OW7-0011-R1b-SM-5L3HF 144.5
GTEX-12WSE-0011-R1b-SM-5GU4V 123.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 123.2
GTEX-12WSM-0011-R1a-SM-5LZW6 117.8
GTEX-WVLH-0011-R1A-SM-4MVOK 117.6
GTEX-139TT-0011-R1a-SM-5LZVD 116.9
GTEX-13O3O-0011-R1b-SM-5KM2K 106.9
GTEX-T5JC-0011-R1A-SM-32PM6 106.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 105.3
GTEX-X585-0011-R1B-SM-46MVE 100.1
GTEX-131XH-0011-R1a-SM-5DUWA 95.2
GTEX-N7MS-0011-R1a-SM-2HMJG 93.6
GTEX-Y8DK-0011-R1A-SM-4RGLO 92.1
GTEX-S7SE-0011-R1A-SM-2XCDE 90.5
GTEX-145LU-0011-R1a-SM-5Q5CE 89.8
GTEX-1399T-0011-R1b-SM-5DUWN 86.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 84.0
GTEX-13N2G-0011-R1b-SM-5MR3G 81.8
GTEX-13RTL-0011-R1a-SM-5PNZ8 80.6
GTEX-XOTO-0011-R1B-SM-4B65C 79.9
GTEX-14ASI-0011-R1b-SM-5S2TY 78.3
GTEX-13NYB-0011-R1b-SM-5KM4F 76.5
GTEX-11ONC-0011-R1a-SM-57WD4 75.2
GTEX-13112-0011-R1b-SM-5HL7K 73.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 73.4
GTEX-13N1W-0011-R1b-SM-5MR4T 73.3
GTEX-131YS-0011-R1a-SM-5DUXC 68.9
GTEX-YFC4-0011-R1a-SM-4V6EH 68.9
GTEX-P44H-0011-R1A-SM-3NM8J 68.2
GTEX-13OVJ-0011-R1b-SM-5L3I6 67.8
GTEX-13FLW-0011-R1b-SM-5LZX2 61.2
GTEX-WZTO-0011-R1B-SM-3NMAR 60.3
GTEX-13FTY-0011-R1a-SM-5LZXE 59.4
GTEX-13SLW-0011-R1a-SM-5S2W7 57.8
GTEX-139T8-0011-R1a-SM-5HL75 57.7
GTEX-13X6I-0011-R1b-SM-5PNZC 56.8
GTEX-WL46-0011-R1A-SM-3LK6M 56.6
GTEX-ZUA1-0011-R1a-SM-4YCE2 56.4
GTEX-13G51-0011-R1a-SM-5LZYR 55.4
GTEX-13JUV-0011-R1a-SM-5LZY4 55.0
GTEX-PVOW-0011-R1A-SM-32PL6 53.9
GTEX-N7MT-0011-R1a-SM-5SI7S 53.2
GTEX-ZF28-0011-R1a-SM-4WWD1 51.7
GTEX-ZVZQ-0011-R1a-SM-57WBU 48.5
GTEX-13OW6-0011-R1a-SM-5L3HQ 46.2
GTEX-13S7M-0011-R1b-SM-5PNZE 45.3
GTEX-145MH-0011-R1b-SM-5PNWY 44.8
GTEX-13NYS-0011-R1b-SM-5MR55 44.2
GTEX-NL3H-0011-R1a-SM-48TDJ 43.9
GTEX-12WSF-0011-R1a-SM-5DUVI 42.6
GTEX-12WSD-0011-R1b-SM-5LZVY 42.3
GTEX-12WSH-0011-R1a-SM-5GU5V 42.0
GTEX-13CF2-0011-R1a-SM-5LZY1 41.9
GTEX-YJ89-0011-R1a-SM-4RGLS 41.4
GTEX-NPJ7-0011-R1a-SM-3GACT 36.3
GTEX-1313W-0011-R1b-SM-5EQ4A 35.1
GTEX-145LS-0011-R1b-SM-5PNUP 34.3
GTEX-11UD1-0011-R1b-SM-5BC7D 34.1
GTEX-RNOR-0011-R1A-SM-5SI8F 33.9
GTEX-13FHP-0011-R1b-SM-5K7XL 33.3
GTEX-13QJC-0011-R1b-SM-5S2UU 31.9
GTEX-TSE9-0011-R1A-SM-3DB7E 31.7
GTEX-13FHO-0011-R1b-SM-5KLZG 30.2
GTEX-132Q8-0011-R1a-SM-5EGLK 30.1
GTEX-T6MN-0011-R1A-SM-32QOY 29.8
GTEX-WWYW-0011-R1A-SM-3TW8G 29.7
GTEX-144GO-0011-R1a-SM-5PNWO 28.1
GTEX-ZE7O-0011-R1a-SM-57WDM 27.2
GTEX-X4XX-0011-R1B-SM-3P622 26.1
GTEX-QVJO-0011-R1A-SM-2S1QI 25.9
GTEX-13OW8-0011-R1a-SM-5L3HI 25.9
GTEX-1212Z-0011-R1b-SM-5BC72 24.1
GTEX-13OVL-0011-R1a-SM-5L3H5 24.0
GTEX-11GSO-0011-R1b-SM-57WD3 23.8
GTEX-11ZTS-0011-R1a-SM-5BC71 23.4
GTEX-ZAB4-0011-R1a-SM-4RGNO 19.8
GTEX-13JVG-0011-R1a-SM-5KM32 19.2
GTEX-R55E-0011-R1A-SM-2TC6N 19.0
GTEX-13OW5-0011-R1b-SM-5L3GE 18.2
GTEX-12WSB-0011-R1b-SM-5P9EY 16.5
GTEX-13RTJ-0011-R1a-SM-5O9D9 16.5
GTEX-QVUS-0011-R1A-SM-3GAD2 15.3
GTEX-QDT8-0011-R1A-SM-32PKS 14.1
GTEX-QMR6-0011-R1A-SM-32PKW 11.2
GTEX-UTHO-0011-R1A-SM-3GIJO 10.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 10.3
GTEX-11ZVC-0011-R1b-SM-5BC6M 9.5
GTEX-XMD1-0011-R1A-SM-4AT4C 9.4
GTEX-13NZA-0011-R1b-SM-5LUAF 7.6
GTEX-PWO3-0011-R1A-SM-2I5EW 7.0
GTEX-NPJ8-0011-R1a-SM-33HCB 5.5
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

35.9

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 35.9
FF:10169-103B7 60 years, female 61.5
FF:10153-102I9 76 years, female 34.2
FF:10374-105G5 89 years, female 11.9

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