Expression of SMIM20 in cancer - Summary - The Human Protein Atlas

We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.

SMIM20

TISSUE

CELL

CANCER

CANCER ATLAS

GENE/PROTEIN

Antibody validation

Dictionary


Level of antibody staining/expression
	High Medium Low Not detected

CANCER ATLAS

Gene description

Small integral membrane protein 20

Protein class

Predicted membrane proteins

Protein evidence

Evidence at protein level

Colorectal cancer

Breast cancer

Prostate cancer

Lung cancer

STAINING SUMMARY

HPA016552

GENE INFORMATION
Gene name	SMIM20 (HGNC Symbol)
Synonyms	C4orf52
Description	Small integral membrane protein 20 (HGNC Symbol)
Entrez gene summary
Chromosome	4
Cytoband	p15.2
Chromosome location (bp)	25861830 - 25929874
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000250317 (version 83.38)
Entrez gene	389203
UniProt	Q8N5G0 (UniProt - Evidence at protein level)
neXtProt	NX_Q8N5G0
Antibodypedia	SMIM20 antibodies

PROTEIN BROWSER

SMIM20-001	SMIM20-002	SMIM20-201

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
SMIM20-001 ENSP00000427407 ENST00000506197	Q8N5G0 [Direct mapping] Small integral membrane protein 20 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0016021 [integral component of membrane] Show all	67 aa 7.7 kDa	No	1
SMIM20-002 ENSP00000429820 ENST00000514384	E5RH91 [Direct mapping] Small integral membrane protein 20 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014) Show all	GO:0016021 [integral component of membrane] Show all	48 aa 5.7 kDa	No	1
SMIM20-201 ENSP00000483831 ENST00000614775	Q8N5G0 [Direct mapping] Small integral membrane protein 20 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014) Show all	GO:0016021 [integral component of membrane] Show all	168 aa 18.4 kDa	No	1

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.