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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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PGA5
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TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation


Dictionary


Tissue proteome

GENERAL INFORMATION

Gene name

PGA5

Gene description

Pepsinogen 5, group I (pepsinogen A)

Protein class

Enzymes
Predicted intracellular proteins
Predicted secreted proteins

Predicted localization

Intracellular,Secreted

Number of transcripts

3
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:Tissue enriched (stomach)
GTEx:Tissue enriched (stomach)

Protein evidence

Evidence at protein level

Protein expression

Selective cytoplasmic expression in stomach.

DATA RELIABILITY

Data reliability
description

Antibody staining consistent with RNA expression data. Caution, targets protein from more than one gene.

Reliability score

Supported based on 1 antibody.
HPA046875
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM) Protein expression (score)
Brain
Cerebral cortex
Hippocampus
N/A
Caudate
N/A
Cerebellum
N/A
Endocrine tissues
Thyroid gland
Parathyroid gland
Adrenal gland
Bone marrow & immune system
Appendix
Bone marrow
Lymph node
Tonsil
Spleen
Muscle tissues
Heart muscle
Skeletal muscle
Smooth muscle
Lung
Nasopharynx
N/A
Bronchus
N/A
Lung
Liver & gallbladder
Liver
Gallbladder
Pancreas
Pancreas
Gastrointestinal tract
Oral mucosa
N/A
Salivary gland
Esophagus
Stomach
Duodenum
Small intestine
Colon
Rectum
Kidney & urinary bladder
Kidney
Urinary bladder
Male tissues
Testis
Epididymis
Prostate
Seminal vesicle
Female tissues
Breast
Vagina
N/A
Cervix, uterine
Endometrium
Fallopian tube
Ovary
Placenta
Adipose & soft tissue
Adipose tissue
Soft tissue
N/A
Skin
Skin
Cerebral cortex

Lymph node

Liver

Stomach

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW

Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW

HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enriched (stomach)
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enriched (stomach)

GENE INFORMATION

Gene name

PGA5

Synonyms

Description

Pepsinogen 5, group I (pepsinogen A) (HGNC Symbol)

Entrez gene summary

This gene encodes a protein precursor of the digestive enzyme pepsin, a member of the peptidase A1 family of endopeptidases. The encoded precursor is secreted by gastric chief cells and undergoes autocatalytic cleavage in acidic conditions to form the active enzyme, which functions in the digestion of dietary proteins. This gene is found in a cluster of related genes on chromosome 11, each of which encodes one of multiple pepsinogens. Pepsinogen levels in serum may serve as a biomarker for atrophic gastritis and gastric cancer. [provided by RefSeq, Jul 2015]

Chromosome

11

Cytoband

q12.2

Chromosome location (bp)

61241042 - 61251448

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000256713 (version 83.38)

Entrez gene

5222

UniProt

P0DJD9 (UniProt - Evidence at protein level)

neXtProt

NX_P0DJD9

Antibodypedia

PGA5 antibodies

PROTEIN BROWSER

PGA5-001
PGA5-005
PGA5-006

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

PGA5-001
ENSP00000309542
ENST00000312403
P0DJD9 [Direct mapping]
Pepsin A-5
Show all
Enzymes
   ENZYME proteins
   Hydrolases
   Peptidases
   Aspartic-type peptidases
   MEMSAT3 predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Show all
GO:0004190 [aspartic-type endopeptidase activity]
GO:0006508 [proteolysis]
GO:0007586 [digestion]
GO:0030163 [protein catabolic process]
GO:0044267 [cellular protein metabolic process]
GO:0070062 [extracellular exosome]
GO:0097486 [multivesicular body lumen]
Show all
388 aa
42 kDa
Yes 0
PGA5-005
ENSP00000441981
ENST00000541528
F5GWT0 [Direct mapping]
Pepsin A-5
Show all
Predicted intracellular proteins
Show all
GO:0004190 [aspartic-type endopeptidase activity]
GO:0006508 [proteolysis]
GO:0030163 [protein catabolic process]
Show all
128 aa
13.3 kDa
No 0
PGA5-006
ENSP00000408739
ENST00000451616
C9JM59 [Direct mapping]
Pepsin A-5
Show all
Predicted intracellular proteins
Show all
GO:0004190 [aspartic-type endopeptidase activity]
GO:0006508 [proteolysis]
GO:0030163 [protein catabolic process]
Show all
234 aa
24.5 kDa
No 0

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