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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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MAP1LC3B2
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ANTIBODY INFORMATION VALIDATION SUMMARY IMMUNOCYTOCHEMISTRY IMMUNOHISTOCHEMISTRY WESTERN BLOT PROTEIN ARRAY ANTIGEN INFORMATION RELEVANT PUBLICATIONS

ANTIBODY INFORMATION

 
 

Antibody HPA043000

 

Antibody HPA052474

 

Antibody HPA052484

 

Antibody HPA053767

 

Provider

Atlas Antibodies
Sigma-Aldrich
  Atlas Antibodies
Sigma-Aldrich
  Atlas Antibodies
Sigma-Aldrich
  Atlas Antibodies
Sigma-Aldrich
 

Product name

HPA043000   HPA052474   HPA052484   HPA053767  

Host species

Rabbit   Rabbit   Rabbit   Rabbit  

Clonality

pAb   pAb   pAb   pAb  

Purity

Affinity purified using the PrEST-antigen as affinity ligand   Affinity purified using the PrEST-antigen as affinity ligand   Affinity purified using the PrEST-antigen as affinity ligand   Affinity purified using the PrEST-antigen as affinity ligand  

Other gene match

MAP1LC3A - ENSG00000101460 [81%]
MAP1LC3B - ENSG00000140941 [100%]
  MAP1LC3A - ENSG00000101460 [81%]
MAP1LC3B - ENSG00000140941 [100%]
  MAP1LC3A - ENSG00000101460 [96%]
MAP1LC3B - ENSG00000140941 [100%]
  MAP1LC3B - ENSG00000140941 [100%]
 

Released in version

16   13   13   13  

References

       

VALIDATION SUMMARY

 
 

Antibody HPA043000

 

Antibody HPA052474

 

Antibody HPA052484

 

Antibody HPA053767

 
Immunocytochemistry

Approved        
Immunohistochemistry

  Uncertain   Uncertain   Uncertain  
Western blot

Uncertain   Uncertain   Supported   Uncertain  
Protein array

Supported   Supported   Supported   Supported  

IMMUNOCYTOCHEMISTRY

 
 

Antibody HPA043000

 

Antibody HPA052474

 

Antibody HPA052484

 

Antibody HPA053767

 

Standard validation

Approved        

       

Figure description

Immunofluorescent staining of human cell line SiHa shows localization to microtubule organizing center.        

Antibody dilution

1:30        

Literature conformity

The subcellular location is partly supported by literature or no literature is available.        

IMMUNOHISTOCHEMISTRY

 
 

Antibody HPA043000

 

Antibody HPA052474

 

Antibody HPA052484

 

Antibody HPA053767

 

Standard validation

  Uncertain   Uncertain   Uncertain  

       

Figure description

  Immunohistochemical staining of human lateral ventricle shows strong cytoplasmic positivity in neuronal cells.   Immunohistochemical staining of human cerebral cortex shows strong cytoplasmic positivity in neuronal cells.   Immunohistochemical staining of human testis shows strong membranous and cytoplasmic positivity in cells in seminiferus ducts and Leydig cells.  

Expression

  RNA: detected in 7 tissues
Protein: detected in 8 cell types
  RNA: detected in 7 tissues
Protein: detected in 23 cell types
  RNA: detected in 7 tissues
Protein: detected in 74 cell types
 

Retrieval

  HIER pH6   HIER pH6   HIER pH6  

Antibody dilution

  1:300   1:250   1:650  

Literature conformity

  Partly consistent with gene/protein characterization data.   Partly consistent with gene/protein characterization data.   Partly consistent with gene/protein characterization data.  

RNA consistency

  Not consistent with RNA expression data.   Not consistent with RNA expression data.   Mainly consistent with RNA expression data.  

WESTERN BLOT

 
 

Antibody HPA043000

 

Antibody HPA052474

 

Antibody HPA052484

 

Antibody HPA053767

 

Standard validation

Uncertain

Analysis performed using a standard panel of samples.
No bands detected.
  Uncertain

Analysis performed using a standard panel of samples.
Single band differing more than +/-20% from predicted size in kDa and not supported by experimental and/or bioinformatic data.
  Supported

Single band corresponding to the predicted size in kDa (+/-20%).
  Uncertain

Analysis performed using a standard panel of samples.
Weak band of predicted size but with additional bands of higher intensity also present.
 

       

Figure description

Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
  Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
  Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: Negative control (vector only transfected HEK293T lysate)
Lane 3: Over-expression Lysate (Co-expressed with a C-terminal myc-DDK tag (~3.1 kDa) in mammalian HEK293T cells, LY403169)
   

Target mass (kDa)

14.7, 14.6, 14.5, 14.3   14.7, 14.6, 14.5, 14.3   14.7, 14.6, 14.5, 14.3   14.7, 14.6, 9  

Antibody dilution

1:250   1:1110   1:250   1:260  

PROTEIN ARRAY

 
 

Antibody HPA043000

 

Antibody HPA052474

 

Antibody HPA052484

 

Antibody HPA053767

 

Standard validation

Supported

Pass with single peak corresponding to interaction only with its own antigen.
  Supported

Pass with single peak corresponding to interaction only with its own antigen.
  Supported

Pass with single peak corresponding to interaction only with its own antigen.
  Supported

Pass with single peak corresponding to interaction only with its own antigen.
 

       

Figure description

Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.   Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.   Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.   Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.  

Antibody dilution

1:3000   1:8900   1:4100   1:2100  

ANTIGEN INFORMATION

 
 

Antibody HPA043000

 

Antibody HPA052474

 

Antibody HPA052484

 

Antibody HPA053767

 

Antigen

Recombinant protein fragment   Recombinant protein fragment   Recombinant protein fragment   Recombinant protein fragment  

Length (aa)

32   32   25   30  

Antigen sequence

NQAFFLLVNGHSMVSVSTPISEVYESEKDEDG
 
NQAFFLLVNGHSMVSVSTPISEVYESEKDEDG
 
TKFLVPDHVNMSELIKIIRRRLQLN
 
MPSEKTFKQRRTFEQRVEDVRLIREQHPTK
 

Matching transcripts

MAP1LC3B2-001 - ENSP00000450524 [100%]
  MAP1LC3B2-001 - ENSP00000450524 [100%]
  MAP1LC3B2-001 - ENSP00000450524 [100%]
  MAP1LC3B2-001 - ENSP00000450524 [100%]
 

Other gene match

MAP1LC3A - ENSG00000101460 [81%]
MAP1LC3B - ENSG00000140941 [100%]
  MAP1LC3A - ENSG00000101460 [81%]
MAP1LC3B - ENSG00000140941 [100%]
  MAP1LC3A - ENSG00000101460 [96%]
MAP1LC3B - ENSG00000140941 [100%]
  MAP1LC3B - ENSG00000140941 [100%]
 
ANTIGEN VIEW
MAP1LC3B2-001
 

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The Human Protein Atlas project is funded
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