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Gene name

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Chromosome

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Reliability

Reliability

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Validation

Method

Validation

Method

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Searches

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Cell type

Expression

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Specificity

Cell line

Specificity

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Detectable

Cell line

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Antibodies

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TAF15
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TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation


Dictionary


Tissue proteome

GENERAL INFORMATION

Gene name

TAF15

Gene description

TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa

Protein class

Cancer-related genes
Disease related genes
Plasma proteins
Predicted intracellular proteins
Predicted membrane proteins

Predicted localization

Intracellular,Membrane

Number of transcripts

7
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:Expressed in all
FANTOM5:Expressed in all

Protein evidence

Evidence at protein level

Protein expression

Ubiquitous nuclear expression.

DATA RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data.

Reliability score

Supported based on 1 antibody.
HPA052059
SHOW MORE

RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM) Protein expression (score)
Brain
Cerebral cortex
Hippocampus
N/A
Caudate
N/A
Cerebellum
N/A
Endocrine tissues
Thyroid gland
Parathyroid gland
Adrenal gland
Bone marrow & immune system
Appendix
Bone marrow
Lymph node
Tonsil
Spleen
Muscle tissues
Heart muscle
Skeletal muscle
Smooth muscle
Lung
Nasopharynx
N/A
Bronchus
N/A
N/A
Lung
Liver & gallbladder
Liver
Gallbladder
Pancreas
Pancreas
Gastrointestinal tract
Oral mucosa
N/A
Salivary gland
Esophagus
Stomach
Duodenum
Small intestine
Colon
Rectum
Kidney & urinary bladder
Kidney
Urinary bladder
Male tissues
Testis
Epididymis
Prostate
Seminal vesicle
Female tissues
Breast
Vagina
N/A
Cervix, uterine
Endometrium
Fallopian tube
Ovary
Placenta
Adipose & soft tissue
Adipose tissue
Soft tissue
N/A
Skin
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW

Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW

HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all

GENE INFORMATION

Gene name

TAF15 (HGNC Symbol)

Synonyms

hTAFII68, Npl3, RBP56, TAF2N

Description

TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa (HGNC Symbol)

Entrez gene summary

This gene encodes a member of the TET family of RNA-binding proteins. The encoded protein plays a role in RNA polymerase II gene transcription as a component of a distinct subset of multi-subunit transcription initiation factor TFIID complexes. Translocations involving this gene play a role in acute leukemia and extraskeletal myxoid chondrosarcoma, and mutations in this gene may play a role in amyotrophic lateral sclerosis. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, May 2012]

Chromosome

17

Cytoband

q12

Chromosome location (bp)

35713791 - 35864615

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000270647 (version 83.38)

Entrez gene

8148

UniProt

Q92804 (UniProt - Evidence at protein level)

neXtProt

NX_Q92804

Antibodypedia

TAF15 antibodies

PROTEIN BROWSER

TAF15-001
TAF15-004
TAF15-006
TAF15-007
TAF15-009
TAF15-014
TAF15-015

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

TAF15-001
ENSP00000474096
ENST00000605844
Q92804 [Direct mapping]
TATA-binding protein-associated factor 2N
Show all
Predicted intracellular proteins
Plasma proteins
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Disease related genes
Protein evidence (Kim et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0003676 [nucleic acid binding]
GO:0003677 [DNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0008270 [zinc ion binding]
GO:0044822 [poly(A) RNA binding]
GO:0045893 [positive regulation of transcription, DNA-templated]
Show all
592 aa
61.8 kDa
No 0
TAF15-004
ENSP00000474609
ENST00000604841
Q92804 [Direct mapping]
TATA-binding protein-associated factor 2N
Show all
Predicted intracellular proteins
Plasma proteins
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Disease related genes
Protein evidence (Kim et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0003676 [nucleic acid binding]
GO:0003677 [DNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0008270 [zinc ion binding]
GO:0044822 [poly(A) RNA binding]
GO:0045893 [positive regulation of transcription, DNA-templated]
Show all
589 aa
61.6 kDa
No 0
TAF15-006
ENSP00000474522
ENST00000603777
A0A075B7D9 [Direct mapping]
TATA-binding protein-associated factor 2N
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Show all
GO:0000166 [nucleotide binding]
GO:0003676 [nucleic acid binding]
GO:0008270 [zinc ion binding]
Show all
449 aa
48.8 kDa
No 1
TAF15-007
ENSP00000475044
ENST00000604879
A0A075B7F2 [Direct mapping]
TATA-binding protein-associated factor 2N
Show all
Predicted intracellular proteins
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Show all
239 aa
26.2 kDa
No 0
TAF15-009
ENSP00000474436
ENST00000603427
A0A075B7D6 [Direct mapping]
TATA-binding protein-associated factor 2N
Show all
Predicted intracellular proteins
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Show all
32 aa
3.5 kDa
No 0
TAF15-014
ENSP00000475147
ENST00000604694
A0A075B7F4 [Direct mapping]
TATA-binding protein-associated factor 2N
Show all
Predicted intracellular proteins
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Show all
GO:0008270 [zinc ion binding]
Show all
214 aa
21.2 kDa
No 0
TAF15-015
ENSP00000474047
ENST00000603967
A0A075B7C1 [Direct mapping]
TATA-binding protein-associated factor 2N
Show all
Predicted intracellular proteins
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Show all
102 aa
10.4 kDa
No 0

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