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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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ANTIBODY INFORMATION VALIDATION SUMMARY IMMUNOCYTOCHEMISTRY IMMUNOHISTOCHEMISTRY WESTERN BLOT PROTEIN ARRAY ANTIGEN INFORMATION RELEVANT PUBLICATIONS

ANTIBODY INFORMATION

 
 

Antibody HPA001233

 

Antibody CAB017185

 

Provider

Atlas Antibodies
Sigma-Aldrich
  Kazusa DNA Research Institute
 

Product name

HPA001233   GX0690  

Host species

Rabbit   Rabbit  

Clonality

pAb   pAb  

Purity

Affinity purified using the PrEST-antigen as affinity ligand   Not known  

Other gene match

   

Released in version

1   4  

References

1    

VALIDATION SUMMARY

 
 

Antibody HPA001233

 

Antibody CAB017185

 
Immunocytochemistry

Supported   Supported  
Immunohistochemistry

Uncertain   Uncertain  
Western blot

Supported   Uncertain  
Protein array

Supported    

IMMUNOCYTOCHEMISTRY

 
 

Antibody HPA001233

 

Antibody CAB017185

 

Standard validation

Supported   Supported  

   

Figure description

Immunofluorescent staining of human cell line U-251 MG shows localization to nucleoplasm & centrosome.   Immunofluorescent staining of human cell line A-431 shows localization to nuclear speckles.  

Antibody dilution

1:44   1:25  

Literature conformity

The subcellular location is supported by literature.   The subcellular location is supported by literature.  

IMMUNOHISTOCHEMISTRY

 
 

Antibody HPA001233

 

Antibody CAB017185

 

Standard validation

Uncertain   Uncertain  

   

Figure description

Immunohistochemical staining of human cerebral cortex shows moderate nuclear positivity in neuronal cells.   Immunohistochemical staining of human fallopian tube shows strong nuclear positivity in glandular cells.  

Expression

RNA: detected in 37 tissues
Protein: detected in 59 cell types
  RNA: detected in 37 tissues
Protein: detected in 79 cell types
 

Retrieval

HIER pH6   HIER pH6  

Antibody dilution

1:100   1:100  

Literature conformity

Partly consistent with gene/protein characterization data.   Partly consistent with gene/protein characterization data.  

RNA consistency

Mainly consistent with RNA expression data.   Mainly consistent with RNA expression data.  

WESTERN BLOT

 
 

Antibody HPA001233

 

Antibody CAB017185

 

Standard validation

Supported

Analysis performed using a standard panel of samples.
Band of predicted size in kDa (+/-20%) with additional bands present.
  Uncertain

Analysis performed using a standard panel of samples.
Weak band of predicted size but with additional bands of higher intensity also present.
 

   

Figure description

Lane 1: Marker [kDa] 207, 110, 79, 49, 32, 25, 17.1
Lane 2: RT4
Lane 3: EFO-21
Lane 4: A-431
Lane 5: Liver
Lane 6: Tonsil
   

Target mass (kDa)

97.5, 93.7, 87.4   97.5, 93.7, 87.4  

Antibody dilution

1:500   1:500  

PROTEIN ARRAY

 
 

Antibody HPA001233

 

Antibody CAB017185

 

Standard validation

Supported

Pass with single peak corresponding to interaction only with its own antigen.
   

   

Figure description

Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.    

Antibody dilution

1:3000    

ANTIGEN INFORMATION

 
 

Antibody HPA001233

 

Antibody CAB017185

 

Antigen

Recombinant protein fragment   Recombinant protein  

Length (aa)

65    

Antigen sequence

GQTFKGLKTKYEQEKDRQNQKLNSVPSILRSNRFRRDAKALEEDEEMWFN
EDEEEEGKAVMPPLE
   

Matching transcripts

PPP4R3B-001 - ENSP00000478677 [94%]
PPP4R3B-002 - ENSP00000483228 [94%]
PPP4R3B-003 - ENSP00000484116 [94%]
   

Other gene match

   
ANTIGEN VIEW
PPP4R3B-001
PPP4R3B-002
PPP4R3B-003

RELEVANT PUBLICATIONS

 
 

Antibody HPA001233

 

Antibody CAB017185

 

1.

Immunofluorescence and fluorescent-protein tagging show high correlation for protein localization in mammalian cells
Stadler C et al
Nat Methods 2013;10(4):315-23
   
 

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