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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:24.3TPM
GTEx:18.8RPKM
FANTOM5:60.9Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Low
Fibroblasts:Not detected
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA019587

  

Antibody HPA020857

  

Adipocytes

 Not detected   Not detected  

Chondrocytes

 Low  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected  
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA019587

  

Antibody HPA020857

  

Adipocytes

 Not detected   Low  

Fibroblasts

 Low   Not detected  

Peripheral nerve

 Not detected  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

24.3
N/A Female, age 80
Sample 1
TPM: 27.7
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 23.0
N/A Female, age 57
Sample 3
TPM: 22.4
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 25.7
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 22.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

18.8

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 19.3
Samples: 350

Max RPKM: 30.7
Min RPKM: 9.4
Std RPKM: 3
Median RPKM: 19.2
GTEX-XYKS-2726-SM-4E3IC 30.7
GTEX-111CU-1826-SM-5GZYN 29.4
GTEX-11EMC-2826-SM-5PNY6 28.7
GTEX-NPJ8-0226-SM-48TBN 28.6
GTEX-OXRK-0326-SM-3NB3R 28.2
GTEX-XQ8I-0526-SM-4BOPS 27.1
GTEX-OHPM-0226-SM-3LK61 26.9
GTEX-P4QT-0226-SM-3LK68 26.6
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 18.0
Samples: 227

Max RPKM: 35.3
Min RPKM: 8.2
Std RPKM: 3.4
Median RPKM: 18.2
GTEX-13IVO-2426-SM-5K7V9 35.3
GTEX-11WQK-1526-SM-5EGKN 27.6
GTEX-13PDP-1226-SM-5K7TW 25.6
GTEX-139D8-1626-SM-5IJFZ 25.5
GTEX-13NZ9-2026-SM-5KM1U 25.4
GTEX-WHWD-0826-SM-3LK6R 24.2
GTEX-XV7Q-1726-SM-4BRUU 24.2
GTEX-ZUA1-2126-SM-57YRB 24.1
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

60.9

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 60.9
FF:10010-101C1 65,65,76 years, mixed 60.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.