Tissue expression of UPF1 - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	19.9	TPM
GTEx:	19.7	RPKM
FANTOM5:	57.6	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

Medium

Antibody staining	Antibody HPA019587	Antibody HPA020857
Squamous epithelial cells	Medium	Low

ESOPHAGUS - HPA RNA-seq

Average TPM	19.9

Female, age 70

Sample 1
TPM: 17.1

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 19.8

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 22.8

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	19.7

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 19.7

Samples: 286

Max RPKM: 30.4
Min RPKM: 11.6
Std RPKM: 3.9
Median RPKM: 19.1

GTEX-12ZZW-1726-SM-5DUVD

30.4

GTEX-13W46-1926-SM-5J2MF

29.8

GTEX-11DZ1-2026-SM-5A5KG

29.6

GTEX-R45C-1226-SM-48FEE

29.5

GTEX-Y111-1626-SM-57WCY

29.3

GTEX-RUSQ-0826-SM-47JWW

28.8

GTEX-RU72-0726-SM-46MUW

28.6

GTEX-ZZPT-1426-SM-5N9C5

28.1

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	57.6

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 57.6

FF:10015-101C6

68,74,75 years, mixed

57.6