Tissue expression of UPF1 - Staining in heart muscle

HEART MUSCLE - Expression summary

Protein expression

RNA expression

HPA:	10.6	TPM
GTEx:	10.5	RPKM
FANTOM5:	34.9	Tags Per Million

HEART MUSCLE - Annotated protein expression

Annotated protein
expression

Myocytes:

Low

Antibody staining	Antibody HPA019587	Antibody HPA020857
Myocytes	Not detected	Medium

HEART MUSCLE - HPA RNA-seq

Average TPM	10.6

Female, age 48

Sample 1
TPM: 9.2

Cell types%

Myocytes: 15
Fibroblasts: 55
Endothelial cells: 25
Other cell types: 5

Female, age 42

Sample 2
TPM: 13.1

Cell types%

Myocytes: 20
Fibroblasts: 45
Endothelial cells: 30
Other cell types: 5

Male, age 53

Sample 3
TPM: 8.3

Cell types%

Myocytes: 20
Fibroblasts: 45
Endothelial cells: 30
Other cell types: 5

Female, age 69

Sample 4
TPM: 12.0

Cell types%

Myocytes: 20
Fibroblasts: 45
Endothelial cells: 30
Other cell types: 5

HEART MUSCLE - GTEx RNA-seq

Average RPKM	10.5

GTEx sample id

RPKM

Heart - Atrial Appendage

Heart - Atrial Appendage
RPKM: 11.3

Samples: 194

Max RPKM: 22.4
Min RPKM: 5.9
Std RPKM: 2.5
Median RPKM: 11

GTEX-X4XX-1126-SM-3NMBY

22.4

GTEX-X261-0926-SM-3NMCY

19.4

GTEX-11EQ8-1326-SM-5EGJQ

19.0

GTEX-X62O-0826-SM-46MW8

17.1

GTEX-ZTTD-0626-SM-4YCCY

16.9

GTEX-146FH-1126-SM-5NQAT

16.7

GTEX-14A5I-1026-SM-5Q5E3

16.2

GTEX-WHWD-0326-SM-3LK6L

16.2

Show all

Heart - Left Ventricle

Heart - Left Ventricle
RPKM: 9.8

Samples: 218

Max RPKM: 18.6
Min RPKM: 4.1
Std RPKM: 2.3
Median RPKM: 9.6

GTEX-XV7Q-0826-SM-4BRV7

18.6

GTEX-QEG5-0926-SM-2TC64

18.0

GTEX-P4QS-0326-SM-2I3EU

17.1

GTEX-146FH-1026-SM-5RQIF

16.6

GTEX-ZAJG-0826-SM-5PNVA

15.8

GTEX-12WSG-0526-SM-5FQTH

15.0

GTEX-11TUW-1026-SM-5GU7D

14.9

GTEX-WHWD-0426-SM-3LK83

14.2

Show all

HEART MUSCLE - FANTOM5 CAGE

Average Tags Per Million	34.9

FANTOM5 sample id

Sample description

Tags Per Million

Heart
Tags Per Million: 54.7

FF:10016-101C7

70,73,74 years, mixed

54.7

Left ventricle
Tags Per Million: 15.1

FF:10078-102A6

73 years, female

15.1