We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
UPF1
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA KIDNEY

GENE/PROTEIN

Antibody validation


Dictionary

Kidney

Tissue proteome

Kidney

KIDNEY - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:17.3TPM
GTEx:18.9RPKM
FANTOM5:50.9Tags Per Million

KIDNEY - Annotated protein expression

Annotated protein
expression

Cells in glomeruli:Not detected
Cells in tubules:Medium
 

Antibody staining

Antibody HPA019587

 

Antibody HPA020857

 

Cells in glomeruli

Low   Not detected  

Cells in tubules

High   Medium  
   
   
   

KIDNEY - HPA RNA-seq

Average TPM

17.3

overview Female, age 58
Sample 1
TPM: 35.2
Cell types%
Cells in tubules: 60
Cells in glomeruli: 20
Fibroblasts: 5
Other cell types: 15
overview Female, age 67
Sample 2
TPM: 24.7
Cell types%
Cells in tubules: 70
Cells in glomeruli: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 55
Sample 3
TPM: 30.8
Cell types%
Cells in tubules: 80
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 5
overview Male, age 46
Sample 4
TPM: 27.6
Cell types%
Cells in tubules: 60
Cells in glomeruli: 25
Fibroblasts: 5
Other cell types: 10
overview Female, age 57
Sample 5
TPM: 2.5
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 6
TPM: 8.2
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 20
overview Male, age 73
Sample 7
TPM: 7.4
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Female, age 59
Sample 8
TPM: 14.9
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 15
overview Female, age 48
Sample 9
TPM: 4.8
Cell types%
Cells in tubules: 60
Cells in glomeruli: 5
Fibroblasts: 10
Other cell types: 25

KIDNEY - GTEx RNA-seq

Average RPKM

18.9

GTEx sample id

RPKM

 

Kidney - Cortex

Kidney - Cortex
RPKM: 18.9
Samples: 32

Max RPKM: 28.8
Min RPKM: 9.6
Std RPKM: 4.3
Median RPKM: 19
GTEX-13112-2126-SM-5GCO4 28.8
GTEX-RN64-1626-SM-48FD7 27.6
GTEX-12696-0926-SM-5FQTV 23.9
GTEX-ZYFG-1626-SM-5GZYY 23.4
GTEX-ZVZP-0926-SM-5GIDB 23.3
GTEX-1399S-0526-SM-5IJG8 22.7
GTEX-ZYT6-2226-SM-5GIC9 22.6
GTEX-1497J-0826-SM-5NQAJ 21.7
GTEX-13RTJ-2226-SM-5S2Q1 21.6
GTEX-147F4-2626-SM-5Q5CS 21.1
GTEX-ZLFU-0926-SM-5P9F8 20.8
GTEX-145MN-0326-SM-5QGQI 20.4
GTEX-UPIC-1126-SM-4IHLO 20.4
GTEX-12WSG-0826-SM-5EQ5A 20.0
GTEX-XPVG-0526-SM-4B65N 20.0
GTEX-13OVL-1826-SM-5KLZR 19.3
GTEX-QLQW-1626-SM-4R1K1 18.7
GTEX-P4QS-1126-SM-3NMD5 18.6
GTEX-13NYB-1726-SM-5N9G2 17.5
GTEX-11GS4-2326-SM-5A5KS 17.4
GTEX-13OVI-1126-SM-5KLZF 17.2
GTEX-11TTK-1926-SM-5PNW8 16.9
GTEX-T5JC-1526-SM-4DM68 16.1
GTEX-ZC5H-1726-SM-5HL7X 15.8
GTEX-Y5V6-2026-SM-5IFHO 15.4
GTEX-QDVN-1626-SM-48TZC 15.2
GTEX-N7MS-1626-SM-3LK5F 15.1
GTEX-13OW6-1826-SM-5N9F9 14.5
GTEX-13O1R-2526-SM-5N9FW 13.4
GTEX-11OF3-1326-SM-5N9FJ 12.6
GTEX-ZYFD-1526-SM-5NQ7T 11.8
GTEX-NPJ8-2226-SM-3TW8D 9.6
Show all

KIDNEY - FANTOM5 CAGE

Average Tags Per Million

50.9

FANTOM5 sample id

Sample description

Tags Per Million

Kidney
Tags Per Million: 50.9
FF:10017-101C8 60,62,63 years, female 50.9

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.