Tissue expression of UPF1 - Staining in skin

SKIN - Expression summary

Protein expression

RNA expression

HPA:	25.8	TPM
GTEx:	24.0	RPKM

SKIN 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:	Low
Keratinocytes:	Medium
Langerhans:	Medium
Melanocytes:	Low

Antibody staining	Antibody HPA019587
Fibroblasts	Low
Keratinocytes	Medium
Langerhans	Medium
Melanocytes	Low

SKIN 2 - Annotated protein expression

Annotated protein
expression

Epidermal cells:	Medium

Antibody staining	Antibody HPA019587	Antibody HPA020857
Epidermal cells	Medium	Medium

SKIN - HPA RNA-seq

Average TPM	25.8

Female, age 34

Sample 1
TPM: 21.3

Cell types%

Keratinocytes: 60
Other cell types: 40

Female, age 30

Sample 2
TPM: 20.2

Cell types%

Keratinocytes: 55
Other cell types: 45

Male, age 57

Sample 3
TPM: 36.1

SKIN - GTEx RNA-seq

Average RPKM	24.0

GTEx sample id

RPKM

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 23.0

Samples: 250

Max RPKM: 40.1
Min RPKM: 13
Std RPKM: 4
Median RPKM: 22.5

GTEX-11P82-1426-SM-5BC5L

40.1

GTEX-X585-2426-SM-46MW2

38.9

GTEX-WHSE-0126-SM-3NMBT

35.6

GTEX-1497J-0226-SM-5QGPU

33.4

GTEX-13OW5-2326-SM-5L3HO

33.1

GTEX-11WQC-1826-SM-5GU59

32.5

GTEX-XXEK-1626-SM-4BRUZ

31.5

GTEX-13IVO-0726-SM-5LZYV

31.3

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Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 24.6

Samples: 357

Max RPKM: 40.7
Min RPKM: 13.4
Std RPKM: 4.1
Median RPKM: 24.4

GTEX-ZTX8-1426-SM-5DUVO

40.7

GTEX-13NYS-0126-SM-5MR3W

37.8

GTEX-XYKS-2126-SM-4E3IB

37.6

GTEX-Y114-2426-SM-4TT8A

37.1

GTEX-12WSJ-1826-SM-5GCNY

35.9

GTEX-11WQK-0526-SM-5EQLD

35.7

GTEX-WFON-2126-SM-3LK7O

34.2

GTEX-13YAN-0326-SM-5O9DF

33.0

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SKIN - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue