Tissue expression of UPF1 - Staining in small intestine

SMALL INTESTINE - Expression summary

Protein expression

RNA expression

HPA:	22.8	TPM
GTEx:	20.6	RPKM
FANTOM5:	64.3	Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:

Medium

Antibody staining	Antibody HPA019587	Antibody HPA020857
Glandular cells	High	Medium

SMALL INTESTINE - HPA RNA-seq

Average TPM	22.8

Male, age 65

Sample 1
TPM: 20.5

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 39

Sample 2
TPM: 24.9

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 68

Sample 3
TPM: 25.2

Cell types%

Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55

Male, age 85

Sample 4
TPM: 20.8

SMALL INTESTINE - GTEx RNA-seq

Average RPKM	20.6

GTEx sample id

RPKM

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 20.6

Samples: 88

Max RPKM: 35.1
Min RPKM: 14.3
Std RPKM: 3.4
Median RPKM: 20.2

GTEX-UPK5-2026-SM-4JBIM

35.1

GTEX-VUSG-1726-SM-4KKZL

28.2

GTEX-WFJO-0926-SM-4LVM2

28.0

GTEX-11NSD-1726-SM-5N9C3

27.9

GTEX-X15G-1426-SM-4PQZK

27.4

GTEX-ZC5H-2326-SM-4WAYT

27.0

GTEX-WH7G-1626-SM-4LVMY

25.6

GTEX-ZYWO-1526-SM-5SIAL

24.6

Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million	64.3

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 64.3

FF:10024-101D6

15,40,85 years, mixed

64.3