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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:39.2TPM
GTEx:9.2RPKM
FANTOM5:97.7Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA024122

 

Glandular cells

Medium  
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

39.2

overview Male, age 65
Sample 1
TPM: 36.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 51.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 38.2
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 30.9

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

9.2

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 9.2
Samples: 88

Max RPKM: 17.4
Min RPKM: 4.9
Std RPKM: 2.5
Median RPKM: 8.8
GTEX-1192X-2526-SM-59868 17.4
GTEX-WEY5-1526-SM-4LMJF 15.9
GTEX-117YX-0326-SM-5GICL 14.9
GTEX-12WSK-1526-SM-5CVNO 14.7
GTEX-ZQUD-0926-SM-57WE3 14.0
GTEX-148VJ-2226-SM-5NQ9M 13.8
GTEX-XXEK-1026-SM-4BRUW 13.7
GTEX-VUSG-1726-SM-4KKZL 13.5
GTEX-WQUQ-2426-SM-4MVNW 13.4
GTEX-111CU-1326-SM-5NQ8L 13.3
GTEX-13OVI-1926-SM-5IJCG 12.8
GTEX-1399R-2026-SM-5K7WN 12.8
GTEX-ZTPG-2626-SM-57WFX 12.0
GTEX-14E6E-1626-SM-5RQI7 11.9
GTEX-ZVZP-1826-SM-5GZXB 11.9
GTEX-WFG7-1726-SM-4LVME 11.4
GTEX-13O61-1326-SM-5KM31 11.0
GTEX-ZYWO-1526-SM-5SIAL 11.0
GTEX-13PL7-2626-SM-5IFH4 10.9
GTEX-ZC5H-2326-SM-4WAYT 10.7
GTEX-1399S-2026-SM-5KM4B 10.6
GTEX-Y3IK-1726-SM-4YCCR 10.5
GTEX-ZTSS-0926-SM-59865 10.5
GTEX-139YR-2226-SM-5IFFW 10.4
GTEX-ZPCL-1726-SM-57WEO 10.1
GTEX-13D11-0726-SM-5LZZB 10.1
GTEX-11NSD-1726-SM-5N9C3 9.8
GTEX-1122O-1326-SM-5H11F 9.8
GTEX-145LT-1026-SM-5LU9O 9.7
GTEX-13113-1226-SM-5EGHT 9.6
GTEX-UPK5-2026-SM-4JBIM 9.6
GTEX-131XG-1726-SM-5LZUR 9.6
GTEX-XAJ8-0526-SM-47JYK 9.5
GTEX-ZTX8-0526-SM-59HLD 9.5
GTEX-ZLV1-1126-SM-4WWBW 9.4
GTEX-133LE-1426-SM-5IFH1 9.4
GTEX-13FTW-2026-SM-5IJE2 9.2
GTEX-ZLFU-1526-SM-4WWBT 9.1
GTEX-WH7G-1626-SM-4LVMY 9.1
GTEX-11I78-1126-SM-5A5K5 9.1
GTEX-ZEX8-1826-SM-57WBH 9.0
GTEX-YB5E-1526-SM-5IFIE 9.0
GTEX-13111-1426-SM-5DUW3 8.9
GTEX-13O21-1026-SM-5IJDU 8.9
GTEX-Y114-1426-SM-4TT6W 8.7
GTEX-11DXZ-1326-SM-5H11X 8.6
GTEX-ZXES-1526-SM-5NQ95 8.6
GTEX-11DXX-1626-SM-5H11H 8.4
GTEX-11XUK-1426-SM-5EQMG 8.4
GTEX-YF7O-1826-SM-5IFIU 8.4
GTEX-13QBU-1926-SM-5IJEW 8.3
GTEX-ZF2S-1726-SM-57WFT 8.3
GTEX-VJYA-0926-SM-4KL1N 8.2
GTEX-11P7K-1626-SM-5GU63 8.0
GTEX-145ME-0926-SM-5O9AR 8.0
GTEX-ZVP2-1726-SM-5GU5P 8.0
GTEX-139T6-1026-SM-5IJGC 7.8
GTEX-131XF-1326-SM-5GCMQ 7.7
GTEX-YEC4-1726-SM-4W21E 7.7
GTEX-XUZC-1426-SM-4BRV3 7.6
GTEX-WFJO-0926-SM-4LVM2 7.6
GTEX-ZZ64-0526-SM-5GZXM 7.5
GTEX-12BJ1-1926-SM-5HL9Z 7.4
GTEX-Y9LG-1626-SM-5IFHM 7.4
GTEX-XGQ4-1326-SM-4GIDU 7.3
GTEX-13CF3-1226-SM-5LZXN 7.2
GTEX-13RTK-0826-SM-5Q5C6 7.2
GTEX-11EQ9-1326-SM-5985X 7.1
GTEX-111YS-1426-SM-5GID8 7.0
GTEX-1399U-2126-SM-5IFEZ 7.0
GTEX-WRHK-1026-SM-4MVOD 7.0
GTEX-X5EB-1626-SM-4E3IV 6.9
GTEX-Z9EW-0926-SM-5CVMM 6.7
GTEX-11P82-0826-SM-5P9GU 6.6
GTEX-ZQG8-2526-SM-57WEQ 6.5
GTEX-13FH7-1226-SM-5IJFK 6.5
GTEX-ZYFG-2026-SM-5E43Y 6.5
GTEX-WFG8-1626-SM-4LVMB 6.3
GTEX-ZP4G-1626-SM-57WGD 6.3
GTEX-XBED-1426-SM-4AT4G 6.3
GTEX-ZVT2-2126-SM-5NQ93 6.2
GTEX-ZPIC-2326-SM-57WDW 6.2
GTEX-Y5LM-1626-SM-4VDTB 6.1
GTEX-14DAR-1426-SM-5RQIR 6.0
GTEX-ZA64-1226-SM-5HL7B 5.9
GTEX-XMK1-1826-SM-4B66F 5.6
GTEX-11VI4-1626-SM-5EQKO 5.2
GTEX-X15G-1426-SM-4PQZK 4.9
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

97.7

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 97.7
FF:10024-101D6 15,40,85 years, mixed 97.7

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