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Gene name

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In atlas

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Method

Validation

Method

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Expression

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Specificity

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Detectable

Cell line

Detectable

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IFRD1
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TISSUE ATLAS PRIMARY DATA STOMACH

GENE/PROTEIN

Antibody validation


Dictionary

Stomach, lower
Stomach, upper

Tissue proteome

Stomach

STOMACH - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:26.4TPM
GTEx:13.3RPKM

STOMACH 1 - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA024122

 

Glandular cells

Medium  
 
 
 

STOMACH 2 - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA024122

 

Glandular cells

Medium  
 
 
 

STOMACH - HPA RNA-seq

Average TPM

26.4

overview Female, age 33
Sample 1
TPM: 20.4
Cell types%
Glandular cells: 60
Smooth muscle cells: 5
Other cell types: 35
N/A Male, age 82
Sample 2
TPM: 29.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 5
Other cell types: 30
overview Male, age 71
Sample 3
TPM: 22.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 5
Other cell types: 45
overview Female, age 66
Sample 4
TPM: 33.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 10
Other cell types: 40

STOMACH - GTEx RNA-seq

Average RPKM

13.3

GTEx sample id

RPKM

 

Stomach

Stomach
RPKM: 13.3
Samples: 193

Max RPKM: 42.5
Min RPKM: 6.3
Std RPKM: 5.7
Median RPKM: 12.3
GTEX-117YW-2226-SM-5N9DB 42.5
GTEX-XXEK-0826-SM-4BRWG 38.1
GTEX-YJ8A-1526-SM-5P9FT 36.9
GTEX-11GSP-2126-SM-5HL5E 36.7
GTEX-13N1W-2026-SM-5K7YU 33.6
GTEX-13S7M-1826-SM-5RQK6 27.4
GTEX-ZYY3-1726-SM-5EGH3 26.4
GTEX-11P82-0726-SM-5PNYL 25.1
GTEX-11NUK-2426-SM-5BC4U 24.1
GTEX-132AR-2426-SM-5IFFD 23.9
GTEX-11I78-1726-SM-5A5M3 22.4
GTEX-11WQK-2626-SM-5EQ4K 22.4
GTEX-ZT9W-1526-SM-4YCDE 22.1
GTEX-13111-1226-SM-5GCNC 21.9
GTEX-139D8-2326-SM-5IFGE 21.7
GTEX-R55C-1026-SM-48FCM 21.2
GTEX-WFJO-1126-SM-4LVLZ 21.2
GTEX-ZAB4-1526-SM-5CVN7 20.6
GTEX-RTLS-2626-SM-46MUJ 19.9
GTEX-ZTX8-0426-SM-59HLG 19.9
GTEX-QLQW-0726-SM-447AA 19.3
GTEX-T6MO-0726-SM-4DM58 19.1
GTEX-U8T8-1226-SM-4E3IH 18.7
GTEX-13PVQ-2126-SM-5L3FW 18.6
GTEX-OHPK-1526-SM-3MJGM 18.1
GTEX-11EQ9-1226-SM-5987E 17.3
GTEX-QXCU-1926-SM-48FE4 17.3
GTEX-OXRK-1626-SM-3NB17 17.2
GTEX-14BMU-1126-SM-5RQJ8 16.9
GTEX-ZLFU-1326-SM-4WWET 16.8
GTEX-PWCY-0926-SM-48TD7 16.7
GTEX-PWOO-1226-SM-48TCO 16.7
GTEX-145LT-1426-SM-5O9B3 16.6
GTEX-YFCO-0826-SM-5LUAG 16.5
GTEX-12WSK-1426-SM-5CVNN 16.1
GTEX-RU1J-0526-SM-46MUT 16.1
GTEX-TMMY-1626-SM-4DXTY 16.0
GTEX-ZV7C-1626-SM-5NQ7E 16.0
GTEX-V955-1326-SM-4JBHR 15.7
GTEX-ZVT3-2126-SM-59HL2 15.7
GTEX-11P7K-1726-SM-5GU6F 15.3
GTEX-ZZ64-0426-SM-5E43F 15.3
GTEX-11TT1-0726-SM-5GU5A 15.2
GTEX-145MO-2226-SM-5Q5BN 15.1
GTEX-14BMV-2226-SM-5RQHX 15.1
GTEX-11EI6-2426-SM-5PNVS 15.0
GTEX-XBEW-1826-SM-4RTWX 15.0
GTEX-13OW6-2526-SM-5IJEC 14.9
GTEX-YEC3-1426-101806-SM-5PNXX 14.9
GTEX-12C56-0526-SM-5FQST 14.8
GTEX-13QJ3-2726-SM-5SI6L 14.8
GTEX-R55G-1126-SM-48FDG 14.8
GTEX-13OVI-2426-SM-5KM4J 14.6
GTEX-13QBU-1126-SM-5LU44 14.6
GTEX-Y8LW-0826-SM-4WWDO 14.6
GTEX-132QS-1826-SM-5IFFN 14.5
GTEX-ZYVF-2726-SM-5GID4 14.5
GTEX-XAJ8-0326-SM-47JYI 14.4
GTEX-UJMC-1226-SM-4IHLI 14.2
GTEX-WHWD-1426-SM-4OORU 14.2
GTEX-ZDYS-1926-SM-5HL59 14.2
GTEX-1399R-1126-SM-5IFIO 14.1
GTEX-ZVP2-1626-SM-5GU5D 14.1
GTEX-Q2AH-1126-SM-48TZM 13.9
GTEX-1399U-1626-SM-5P9J3 13.8
GTEX-XQ8I-2026-SM-4BOOL 13.8
GTEX-S3XE-1026-SM-4AD4O 13.7
GTEX-SIU7-1426-SM-4BRWT 13.7
GTEX-P4PQ-1526-SM-3NMCK 13.6
GTEX-NFK9-1526-SM-3LK7B 13.5
GTEX-SUCS-0926-SM-4DM4Z 13.5
GTEX-U4B1-1026-SM-4DXT1 13.5
GTEX-1122O-1926-SM-5EGIQ 13.4
GTEX-QLQ7-0826-SM-447B3 13.3
GTEX-TKQ1-0526-SM-4DXTG 13.3
GTEX-PW2O-1226-SM-48TCH 13.0
GTEX-Q734-1026-SM-48U16 13.0
GTEX-W5WG-1726-SM-4LMI5 13.0
GTEX-XBED-1226-SM-4AT5V 13.0
GTEX-111YS-1126-SM-5GZYQ 12.9
GTEX-QV31-0626-SM-447C5 12.9
GTEX-12WSD-2326-SM-59HKQ 12.8
GTEX-ZVT2-1626-SM-51MRC 12.8
GTEX-12696-1726-SM-5EQLH 12.7
GTEX-13O21-0926-SM-5IFGT 12.7
GTEX-RM2N-0826-SM-48FD3 12.7
GTEX-XV7Q-1326-SM-4BRWM 12.7
GTEX-WEY5-1226-SM-4LMIQ 12.6
GTEX-12WSG-2026-SM-5FQUU 12.5
GTEX-13U4I-2526-SM-5SI8Z 12.5
GTEX-144GN-1226-SM-5O991 12.5
GTEX-P4QT-1526-SM-3NMCT 12.5
GTEX-ZV6S-0926-SM-57WGB 12.5
GTEX-13113-0726-SM-5LZUF 12.4
GTEX-131XG-1226-SM-5EGH9 12.4
GTEX-13FTX-0726-SM-5N9BI 12.4
GTEX-11EM3-1026-SM-5A5KL 12.3
GTEX-13O61-1126-SM-5L3FI 12.3
GTEX-UJHI-1026-SM-4IHJP 12.3
GTEX-1339X-1426-SM-5K7YO 12.2
GTEX-Y5LM-1326-SM-5RQIS 12.2
GTEX-ZE7O-3026-SM-51MS4 12.2
GTEX-133LE-1326-SM-5IFGO 11.9
GTEX-139YR-1926-SM-5LZXM 11.9
GTEX-PLZ6-0826-SM-3P61K 11.8
GTEX-S341-0626-SM-4AD5T 11.7
GTEX-ZZPU-1426-SM-5GZZ6 11.7
GTEX-13FTW-1726-SM-5KM2B 11.6
GTEX-R53T-1226-SM-48FCT 11.6
GTEX-131XE-2226-SM-5PNYX 11.5
GTEX-SNOS-0826-SM-4DM5N 11.5
GTEX-ZVZP-1726-SM-5GZWY 11.5
GTEX-T5JC-1926-SM-4DM6Q 11.4
GTEX-UPK5-2126-SM-4JBJK 11.4
GTEX-QV44-1226-SM-4R1KE 11.3
GTEX-Y114-1226-SM-4TT88 11.3
GTEX-P78B-1826-SM-3P5YX 11.2
GTEX-R55D-1526-SM-48FEJ 11.2
GTEX-ZP4G-1226-SM-4WWCJ 11.2
GTEX-WRHK-0626-SM-4MVOE 11.1
GTEX-S4P3-0726-SM-4AD57 10.9
GTEX-145MN-1326-SM-5NQ9S 10.8
GTEX-O5YW-1526-SM-3MJGL 10.8
GTEX-Y3I4-1626-SM-4TT7W 10.8
GTEX-T5JW-0926-SM-4DM5K 10.6
GTEX-WFON-1126-SM-4LVMA 10.5
GTEX-WH7G-1526-SM-4LVMX 10.5
GTEX-Y8E4-1526-SM-4WWDI 10.4
GTEX-RWS6-0926-SM-47JXE 10.3
GTEX-ZF2S-1426-SM-57WET 10.3
GTEX-13D11-2126-SM-5IFH2 10.2
GTEX-13O3Q-2126-SM-5KM4C 10.2
GTEX-XPVG-1526-SM-4B66C 10.2
GTEX-Y3IK-1426-SM-4YCES 10.2
GTEX-Y9LG-1026-SM-5IFJN 10.2
GTEX-146FR-2026-SM-5NQAI 10.1
GTEX-XUZC-0726-SM-4BOPH 10.0
GTEX-Y5V6-1326-SM-4VDTF 10.0
GTEX-11VI4-0326-SM-5EQ6L 9.9
GTEX-X15G-1126-SM-4PQZG 9.9
GTEX-ZA64-0826-SM-5HL9U 9.9
GTEX-ZPU1-1626-SM-4WWB2 9.8
GTEX-13X6H-1626-SM-5Q5CT 9.7
GTEX-Q2AI-0826-SM-48TZO 9.7
GTEX-ZYFG-1326-SM-5GICJ 9.7
GTEX-13CF3-1926-SM-5K7WF 9.6
GTEX-S95S-0826-SM-4B64N 9.6
GTEX-ZQUD-0826-SM-57WDQ 9.5
GTEX-111CU-0926-SM-5EGIK 9.4
GTEX-WFG7-1326-SM-4LMK1 9.4
GTEX-YEC4-1426-SM-5IFHS 9.4
GTEX-ZLV1-0826-SM-4WWEQ 9.4
GTEX-TKQ2-0926-SM-4DXU5 9.3
GTEX-XUJ4-1226-SM-4BOPD 9.3
GTEX-VJYA-1026-SM-4KL21 9.2
GTEX-131XF-1226-SM-5HL8V 9.1
GTEX-OOBJ-1526-SM-3NB1Q 9.0
GTEX-PX3G-1526-SM-48U11 8.8
GTEX-11NSD-1426-SM-5HL67 8.7
GTEX-13RTK-0226-SM-5RQHR 8.7
GTEX-S4Z8-1226-SM-4AD6W 8.7
GTEX-QMRM-1126-SM-447BN 8.6
GTEX-ZY6K-0726-SM-5A5L8 8.6
GTEX-QCQG-0526-SM-48U2A 8.5
GTEX-S4Q7-0726-SM-4AD5F 8.5
GTEX-WZTO-2126-SM-4PQYW 8.5
GTEX-11DXX-1326-SM-5GIDZ 8.4
GTEX-13FH7-1026-SM-5IJGF 8.4
GTEX-V1D1-1726-SM-4JBHB 8.4
GTEX-146FH-2126-SM-5SI9U 8.3
GTEX-U3ZN-2026-SM-4DXUC 8.3
GTEX-12BJ1-1726-SM-5HL9B 8.2
GTEX-OIZH-1526-SM-3NB1J 8.2
GTEX-117YX-1026-SM-5H11V 8.0
GTEX-QDVJ-1426-SM-48U1Y 8.0
GTEX-S7SF-0626-SM-4AD4V 8.0
GTEX-T8EM-1226-SM-4DM5J 8.0
GTEX-1211K-1426-SM-5FQTF 7.9
GTEX-QDVN-1226-SM-48TZ5 7.8
GTEX-SNMC-0626-SM-4DM6H 7.7
GTEX-ZXES-1426-SM-5NQ8S 7.7
GTEX-UPIC-1826-SM-4IHKC 7.6
GTEX-S4UY-1626-SM-4AD55 7.5
GTEX-ZPIC-2026-SM-57WG3 7.5
GTEX-1399S-1626-SM-5P9GI 7.3
GTEX-144GM-1726-SM-5O9AS 7.3
GTEX-12WSJ-0926-SM-5P9JD 7.2
GTEX-PWN1-1526-SM-48TDA 7.2
GTEX-145ME-1026-SM-5O9B4 7.1
GTEX-WHPG-0426-SM-4M1XW 7.0
GTEX-P4PP-1526-SM-3P61M 6.6
GTEX-POMQ-0826-SM-3P61H 6.3
GTEX-WFG8-1326-SM-4LVN3 6.3
Show all

STOMACH - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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